Gm19427 Pseudogene Detail

Summary

• Symbol
  Gm19427
• Name
  predicted gene, 19427

• Feature Type
  pseudogene
• IDs
  MGI:5011612
  NCBI Gene: 105243453
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:72459010-72459217 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 40.08 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011612	pseudogene	Chr9:72458822-72459465 (+)
129S1/SvImJ	ENSMUSG00200043770	pseudogene	Chr9:69519393-69519600 (+)
A/J	ENSMUSG00195027340	pseudogene	Chr9:69311793-69312000 (+)
AKR/J	ENSMUSG00220041668	pseudogene	Chr9:69476275-69476482 (+)
BALB/cJ	ENSMUSG00180018228	pseudogene	Chr9:69426191-69426398 (+)
C3H/HeJ	ENSMUSG00175014153	pseudogene	Chr9:69439332-69439539 (+)
C57BL/6NJ	ENSMUSG00215033970	pseudogene	Chr9:69406093-69406300 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012411	pseudogene	Chr9:69681912-69682119 (+)
CAST/EiJ	ENSTCUG00005034208	pseudogene	Chr9:69251888-69252095 (+)
CBA/J	ENSMUSG00210014806	pseudogene	Chr9:69519910-69520117 (+)
DBA/2J	ENSMUSG00185036637	pseudogene	Chr9:69543775-69543982 (+)
FVB/NJ	ENSMUSG00205037158	pseudogene	Chr9:69817159-69817366 (+)
JF1/MsJ	ENSUMUG00000041490	pseudogene	Chr9:69594845-69595052 (+)
LP/J	ENSMUSG00230028300	pseudogene	Chr9:69714371-69714578 (+)
NOD/ShiLtJ	ENSMUSG00190023387	pseudogene	Chr9:69647811-69648018 (+)
NZO/HlLtJ	ENSMUSG00225046992	pseudogene	Chr9:69850348-69850555 (+)
PWK/PhJ	ENSLUMG00010028406	pseudogene	Chr9:69511836-69512043 (+)
SPRET/EiJ	ENSMSPG00010022113	pseudogene	Chr9:70612991-70613198 (+)
WSB/EiJ	ENSIUOG00005026759	pseudogene	Chr9:69025214-69025421 (+)

Homology

• Gene Tree
  Gm19427
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm19427
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000099310 (Evidence)
• NCBI Gene
  105243453

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099310	Ensembl Gene Model | MGI Sequence Detail	208	C57BL/6J
transcript	ENSMUST00000183619	Ensembl | MGI Sequence Detail	208	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm19427:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr86014	Chr9:72458404-72458408 (+)	-604 bp