Gm19385 Gene Detail

Summary

• Symbol
  Gm19385
• Name
  predicted gene, 19385

• Feature Type
  lncRNA gene
• IDs
  MGI:5011570
  NCBI Gene: 105243573
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:120689958-120695933 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 72.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  247 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011570	lncRNA gene	Chr9:120688879-120695933 (-)
129S1/SvImJ	ENSMUSG00200032526	lncRNA gene	Chr9:117816880-117822024 (-)
A/J	ENSMUSG00195029273	lncRNA gene	Chr9:116992129-116997262 (-)
AKR/J	ENSMUSG00220020526	lncRNA gene	Chr9:117459520-117464734 (-)
BALB/cJ	ENSMUSG00180030225	lncRNA gene	Chr9:117529376-117534506 (-)
C3H/HeJ	ENSMUSG00175019431	lncRNA gene	Chr9:117772648-117777777 (-)
C57BL/6NJ	ENSMUSG00215034745	lncRNA gene	Chr9:117647926-117653074 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017032	lncRNA gene	Chr9:117389459-117394659 (-)
CBA/J	ENSMUSG00210042183	lncRNA gene	Chr9:117498314-117503526 (-)
DBA/2J	ENSMUSG00185017843	lncRNA gene	Chr9:117832543-117837753 (-)
FVB/NJ	ENSMUSG00205029380	lncRNA gene	Chr9:117660873-117666004 (-)
JF1/MsJ	ENSUMUG00000049920	lncRNA gene	Chr9:117672433-117677641 (-)
LP/J	ENSMUSG00230038400	lncRNA gene	Chr9:117945131-117950274 (-)
NOD/ShiLtJ	ENSMUSG00190015571	lncRNA gene	Chr9:117426229-117431372 (-)
NZO/HlLtJ	ENSMUSG00225023932	lncRNA gene	Chr9:118209453-118214594 (-)
PWK/PhJ	ENSLUMG00010037377	lncRNA gene	Chr9:117558075-117563247 (-)
SPRET/EiJ	ENSMSPG00010026677	lncRNA gene	Chr9:119254785-119260078 (-)
WSB/EiJ	ENSIUOG00005022766	lncRNA gene	Chr9:116871623-116876844 (-)

Homology

• Gene Tree
  Gm19385
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2

• Ensembl
  ENSMUSG00000110730 (Evidence)
• NCBI Gene
  105243573

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110730	Ensembl Gene Model | MGI Sequence Detail	5976	C57BL/6J
transcript	ENSMUST00000214714	Ensembl | MGI Sequence Detail	2647	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm19385:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr92033	Chr9:120695606-120695615 (-)	322 bp