Gm19291 Pseudogene Detail

Summary

• Symbol
  Gm19291
• Name
  predicted gene, 19291

• Feature Type
  pseudogene
• IDs
  MGI:5011476
  NCBI Gene: 100502622
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:70462194-70462572 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 40.27 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011476	pseudogene	Chr16:70462193-70462577 (+)
129S1/SvImJ	ENSMUSG00200008666	pseudogene	Chr16:67342482-67342860 (+)
A/J	ENSMUSG00195001585	pseudogene	Chr16:67059233-67059611 (+)
AKR/J	ENSMUSG00220005609	pseudogene	Chr16:67357839-67358217 (+)
BALB/cJ	ENSMUSG00180001664	pseudogene	Chr16:67198227-67198605 (+)
C3H/HeJ	ENSMUSG00175004569	pseudogene	Chr16:67469866-67470244 (+)
C57BL/6NJ	ENSMUSG00215015898	pseudogene	Chr16:67304930-67305308 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012768	pseudogene	Chr16:67306995-67307373 (+)
CBA/J	ENSMUSG00210015334	pseudogene	Chr16:67427175-67427553 (+)
DBA/2J	ENSMUSG00185004594	pseudogene	Chr16:67363107-67363485 (+)
FVB/NJ	ENSMUSG00205012262	pseudogene	Chr16:67074624-67075002 (+)
JF1/MsJ	ENSUMUG00000016595	pseudogene	Chr16:67580015-67580393 (+)
LP/J	ENSMUSG00230007881	pseudogene	Chr16:69928483-69928861 (+)
NOD/ShiLtJ	ENSMUSG00190016979	pseudogene	Chr16:67397515-67397893 (+)
NZO/HlLtJ	ENSMUSG00225029845	pseudogene	Chr16:73164391-73164769 (+)
PWK/PhJ	ENSLUMG00010011751	pseudogene	Chr16:67251256-67251634 (+)
SPRET/EiJ	ENSMSPG00010002126	pseudogene	Chr16:67944387-67944766 (+)
WSB/EiJ	ENSIUOG00005002348	pseudogene	Chr16:67483739-67484117 (+)

Homology

• Gene Tree
  Gm19291
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Genomic Mutations
  1 involving Gm19291
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000116758 (Evidence)
• NCBI Gene
  100502622

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116758	Ensembl Gene Model | MGI Sequence Detail	379	C57BL/6J
transcript	ENSMUST00000232593	Ensembl | MGI Sequence Detail	379	Not Applicable

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76