Gm19248 Pseudogene Detail

Summary

• Symbol
  Gm19248
• Name
  predicted gene, 19248

• Feature Type
  pseudogene
• IDs
  MGI:5011433
  NCBI Gene: 100462932
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:46616996-46617105 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 30.65 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011433	pseudogene	Chr7:46616895-46617365 (+)
129S1/SvImJ	ENSMUSG00200032760	pseudogene	Chr7:34234773-34234882 (+)
A/J	ENSMUSG00195049318	pseudogene	Chr7:38251150-38251259 (+)
AKR/J	ENSMUSG00220009136	pseudogene	Chr7:32546514-32546623 (+)
BALB/cJ	ENSMUSG00180043905	pseudogene	Chr7:35126535-35126644 (+)
C3H/HeJ	ENSMUSG00175040609	pseudogene	Chr7:35670685-35670794 (+)
C57BL/6NJ	ENSMUSG00215046261	pseudogene	Chr7:34910166-34910275 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048116	pseudogene	Chr7:38655319-38655428 (+)
CBA/J	ENSMUSG00210050402	pseudogene	Chr7:36021068-36021177 (+)
DBA/2J	ENSMUSG00185050388	pseudogene	Chr7:39917526-39917635 (+)
FVB/NJ	ENSMUSG00205048157	pseudogene	Chr7:35565675-35565784 (+)
JF1/MsJ	ENSUMUG00000055328	pseudogene	Chr7:44402889-44402998 (+)
LP/J	ENSMUSG00230051823	pseudogene	Chr7:45342176-45342285 (+)
NOD/ShiLtJ	ENSMUSG00190050463	pseudogene	Chr7:35893305-35893414 (+)
NZO/HlLtJ	ENSMUSG00225018414	pseudogene	Chr7:43545054-43545163 (+)
PWK/PhJ	ENSLUMG00010049542	pseudogene	Chr7:34864454-34864563 (+)
SPRET/EiJ	ENSMSPG00010045209	pseudogene	Chr7:34646992-34647101 (+)
WSB/EiJ	ENSIUOG00005031314	pseudogene	Chr7:36448020-36448129 (+)

Homology

• Gene Tree
  Gm19248
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110416 (Evidence)
• NCBI Gene
  100462932

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110416	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00000209404	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;