Gm19239 Pseudogene Detail

Summary

• Symbol
  Gm19239
• Name
  predicted gene, 19239

• Feature Type
  pseudogene
• IDs
  MGI:5011424
  NCBI Gene: 100418481
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:87974657-87975178 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 45.10 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  192 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011424	pseudogene	Chr13:87974651-87975376 (+)
129S1/SvImJ	ENSMUSG00200008956	pseudogene	Chr13:82442265-82442786 (+)
A/J	ENSMUSG00195024162	pseudogene	Chr13:82979379-82979900 (+)
AKR/J	ENSMUSG00220014073	pseudogene	Chr13:81457328-81457849 (+)
BALB/cJ	ENSMUSG00180016111	pseudogene	Chr13:83475403-83475924 (+)
C3H/HeJ	ENSMUSG00175023388	pseudogene	Chr13:83675945-83676466 (+)
C57BL/6NJ	ENSMUSG00215003016	pseudogene	Chr13:83562055-83562576 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009559	pseudogene	Chr13:82765727-82766248 (+)
CBA/J	ENSMUSG00210024707	pseudogene	Chr13:82950705-82951226 (+)
DBA/2J	ENSMUSG00185010031	pseudogene	Chr13:86642496-86643017 (+)
FVB/NJ	ENSMUSG00205008588	pseudogene	Chr13:82401875-82402396 (+)
JF1/MsJ	ENSUMUG00000022919	pseudogene	Chr13:86327894-86328415 (+)
LP/J	ENSMUSG00230004573	pseudogene	Chr13:96672820-96673341 (+)
NOD/ShiLtJ	ENSMUSG00190018697	pseudogene	Chr13:83316633-83317154 (+)
NZO/HlLtJ	ENSMUSG00225030846	pseudogene	Chr13:89190075-89190596 (+)
PWK/PhJ	ENSLUMG00010012153	pseudogene	Chr13:82426656-82427177 (+)
SPRET/EiJ	ENSMSPG00010006697	pseudogene	Chr13:83647566-83648087 (+)
WSB/EiJ	ENSIUOG00005031485	pseudogene	Chr13:82329567-82330088 (+)

Homology

• Gene Tree
  Gm19239
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm19239
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000114674 (Evidence)
• NCBI Gene
  100418481

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114674	Ensembl Gene Model | MGI Sequence Detail	522	C57BL/6J
transcript	ENSMUST00000224915	Ensembl | MGI Sequence Detail	522	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69