Gm19233 Pseudogene Detail

Summary

• Symbol
  Gm19233
• Name
  predicted gene, 19233

• Feature Type
  pseudogene
• IDs
  MGI:5011418
  NCBI Gene: 100418475
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:101107482-101108417 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 52.32 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  176 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011418	pseudogene	Chr10:101107482-101108478 (+)
129S1/SvImJ	ENSMUSG00200020587	pseudogene	Chr10:97593088-97594023 (+)
A/J	ENSMUSG00195017629	pseudogene	Chr10:98024429-98025364 (+)
AKR/J	ENSMUSG00220026668	pseudogene	Chr10:97576054-97576989 (+)
BALB/cJ	ENSMUSG00180009668	pseudogene	Chr10:98031844-98032779 (+)
C3H/HeJ	ENSMUSG00175006045	pseudogene	Chr10:97913347-97914282 (+)
C57BL/6NJ	ENSMUSG00215008595	pseudogene	Chr10:97626208-97627143 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006298	pseudogene	Chr10:97210155-97211090 (+)
CBA/J	ENSMUSG00210023010	pseudogene	Chr10:97804289-97805224 (+)
DBA/2J	ENSMUSG00185019450	pseudogene	Chr10:97974024-97974959 (+)
FVB/NJ	ENSMUSG00205004055	pseudogene	Chr10:97451395-97452330 (+)
JF1/MsJ	ENSUMUG00000029836	pseudogene	Chr10:99378006-99378942 (+)
LP/J	ENSMUSG00230022941	pseudogene	Chr10:99892426-99893361 (+)
NOD/ShiLtJ	ENSMUSG00190028531	pseudogene	Chr10:98084518-98085453 (+)
NZO/HlLtJ	ENSMUSG00225040969	pseudogene	Chr10:104123540-104124475 (+)
PWK/PhJ	ENSLUMG00010006136	pseudogene	Chr10:97656860-97657795 (+)
SPRET/EiJ	ENSMSPG00010010840	pseudogene	Chr10:99413575-99414508 (+)
WSB/EiJ	ENSIUOG00005013395	pseudogene	Chr10:97709896-97710831 (+)

Homology

• Gene Tree
  Gm19233
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm19233
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000111906 (Evidence)
• NCBI Gene
  100418475

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111906	Ensembl Gene Model | MGI Sequence Detail	936	C57BL/6J
transcript	ENSMUST00000219772	Ensembl | MGI Sequence Detail	936	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87