Gm19232 Pseudogene Detail

Summary

• Symbol
  Gm19232
• Name
  predicted gene, 19232

• Feature Type
  pseudogene
• IDs
  MGI:5011417
  NCBI Gene: 100418472
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:100553619-100554270 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 49.57 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011417	pseudogene	Chr8:100553514-100554290 (-)
129S1/SvImJ	ENSMUSG00200015263	pseudogene	Chr8:94861123-94861774 (-)
A/J	ENSMUSG00195004205	pseudogene	Chr8:95240861-95241512 (-)
AKR/J	ENSMUSG00220012027	pseudogene	Chr8:95300907-95301558 (-)
BALB/cJ	ENSMUSG00180004327	pseudogene	Chr8:95163145-95163796 (-)
C3H/HeJ	ENSMUSG00175002815	pseudogene	Chr8:95245277-95245928 (-)
C57BL/6NJ	ENSMUSG00215001351	pseudogene	Chr8:94830668-94831319 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024334	pseudogene	Chr8:94642633-94643284 (-)
CBA/J	ENSMUSG00210015443	pseudogene	Chr8:95174193-95174844 (-)
DBA/2J	ENSMUSG00185005792	pseudogene	Chr8:101283127-101283778 (-)
FVB/NJ	ENSMUSG00205017577	pseudogene	Chr8:94226206-94226857 (-)
JF1/MsJ	ENSUMUG00000016887	pseudogene	Chr8:103616019-103616670 (-)
LP/J	ENSMUSG00230008745	pseudogene	Chr8:104906227-104906878 (-)
NOD/ShiLtJ	ENSMUSG00190013966	pseudogene	Chr8:95300573-95301224 (-)
NZO/HlLtJ	ENSMUSG00225011871	pseudogene	Chr8:108313113-108313764 (-)
PWK/PhJ	ENSLUMG00010004370	pseudogene	Chr8:95107247-95107899 (-)
SPRET/EiJ	ENSMSPG00010006638	pseudogene	Chr8:97193597-97194248 (-)
WSB/EiJ	ENSIUOG00005006112	pseudogene	Chr8:95955970-95956621 (-)

Homology

• Gene Tree
  Gm19232
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000109939 (Evidence)
• NCBI Gene
  100418472

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109939	Ensembl Gene Model | MGI Sequence Detail	652	C57BL/6J
transcript	ENSMUST00000211621	Ensembl | MGI Sequence Detail	652	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;