Gm19227 Pseudogene Detail

Summary

• Symbol
  Gm19227
• Name
  predicted gene, 19227

• Feature Type
  pseudogene
• IDs
  MGI:5011412
  NCBI Gene: 100418462
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:7808429-7808962 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 3.79 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011412	pseudogene	Chr15:7808429-7809527 (+)
129S1/SvImJ	ENSMUSG00200034010	pseudogene	Chr15:4784637-4785647 (+)
A/J	ENSMUSG00195010632	pseudogene	Chr15:4702032-4703042 (+)
AKR/J	ENSMUSG00220023203	pseudogene	Chr15:4551670-4552627 (+)
BALB/cJ	ENSMUSG00180036940	pseudogene	Chr15:4679180-4680190 (+)
C3H/HeJ	ENSMUSG00175032834	pseudogene	Chr15:4839295-4840305 (+)
C57BL/6NJ	ENSMUSG00215030616	pseudogene	Chr15:4692439-4693449 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025798	pseudogene	Chr15:4737782-4738527 (+)
CBA/J	ENSMUSG00210026010	pseudogene	Chr15:4824269-4825279 (+)
DBA/2J	ENSMUSG00185033272	pseudogene	Chr15:4779253-4780263 (+)
FVB/NJ	ENSMUSG00205031615	pseudogene	Chr15:4695415-4696425 (+)
JF1/MsJ	ENSUMUG00000039152	pseudogene	Chr15:4809317-4809956 (+)
LP/J	ENSMUSG00230020425	pseudogene	Chr15:8277753-8278763 (+)
NOD/ShiLtJ	ENSMUSG00190010361	pseudogene	Chr15:4766881-4767891 (+)
NZO/HlLtJ	ENSMUSG00225034765	pseudogene	Chr15:8529720-8530730 (+)
PWK/PhJ	ENSLUMG00010037567	pseudogene	Chr15:4836062-4836701 (+)
SPRET/EiJ	ENSMSPG00010033789	pseudogene	Chr15:4866667-4867253 (+)
WSB/EiJ	ENSIUOG00005029971	pseudogene	Chr15:4677384-4678394 (+)

Homology

• Gene Tree
  Gm19227
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Transposon induced
  1
• Genomic Mutations
  1 involving Gm19227
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000115765 (Evidence)
• NCBI Gene
  100418462

Representative Sequences			Length	Strain/Species
genomic	100418462	NCBI Gene Model | MGI Sequence Detail	534	C57BL/6J

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:175597 Overbeek PA, Direct Data Submission for Overbeek Lentiviral Transgenic Lines. MGI Direct Data Submission. 2011;