Gm19174 Pseudogene Detail

Summary

• Symbol
  Gm19174
• Name
  predicted gene, 19174

• Feature Type
  pseudogene
• IDs
  MGI:5011359
  NCBI Gene: 100418384
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:18311838-18314151 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 7.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  162 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011359	pseudogene	Chr9:18311836-18314154 (+)
129S1/SvImJ	ENSMUSG00200049442	pseudogene	Chr9:15178189-15180502 (+)
A/J	ENSMUSG00195039747	pseudogene	Chr9:15101854-15104167 (+)
AKR/J	ENSMUSG00220037304	pseudogene	Chr9:15080367-15082680 (+)
BALB/cJ	ENSMUSG00180044903	pseudogene	Chr9:15229922-15232235 (+)
C3H/HeJ	ENSMUSG00175045798	pseudogene	Chr9:15198629-15200942 (+)
C57BL/6NJ	ENSMUSG00215039400	pseudogene	Chr9:15191601-15193914 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035227	pseudogene	Chr9:15126852-15129155 (+)
CBA/J	ENSMUSG00210046613	pseudogene	Chr9:15179932-15182245 (+)
DBA/2J	ENSMUSG00185026954	pseudogene	Chr9:15295322-15297635 (+)
FVB/NJ	ENSMUSG00205044133	pseudogene	Chr9:15409847-15412160 (+)
JF1/MsJ	ENSUMUG00000049123	pseudogene	Chr9:15255036-15257346 (+)
LP/J	ENSMUSG00230043993	pseudogene	Chr9:15676371-15678684 (+)
NOD/ShiLtJ	ENSMUSG00190043664	pseudogene	Chr9:15210763-15213076 (+)
NZO/HlLtJ	ENSMUSG00225050968	pseudogene	Chr9:15564574-15566887 (+)
PWK/PhJ	ENSLUMG00010047524	pseudogene	Chr9:15207160-15209464 (+)
SPRET/EiJ	ENSMSPG00010024826	pseudogene	Chr9:15421175-15423487 (+)
WSB/EiJ	ENSIUOG00005045904	pseudogene	Chr9:14743991-14746304 (+)

Homology

• Gene Tree
  Gm19174
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110944 (Evidence)
• NCBI Gene
  100418384

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110944	Ensembl Gene Model | MGI Sequence Detail	2314	C57BL/6J
transcript	ENSMUST00000216944	Ensembl | MGI Sequence Detail	956	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;