Gm19142 Pseudogene Detail

Summary

• Symbol
  Gm19142
• Name
  predicted gene, 19142

• Feature Type
  pseudogene
• IDs
  MGI:5011327
  NCBI Gene: 100418330
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:44624479-44625869 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 29.11 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  308 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011327	pseudogene	Chr16:44623908-44625869 (-)
129S1/SvImJ	ENSMUSG00200021659	pseudogene	Chr16:41529967-41531926 (-)
A/J	ENSMUSG00195003602	pseudogene	Chr16:41115080-41117039 (-)
AKR/J	ENSMUSG00220022810	pseudogene	Chr16:41457130-41459081 (-)
BALB/cJ	ENSMUSG00180029456	pseudogene	Chr16:41321521-41323480 (-)
C3H/HeJ	ENSMUSG00175026073	pseudogene	Chr16:41592069-41594028 (-)
C57BL/6NJ	ENSMUSG00215008462	pseudogene	Chr16:41404756-41406715 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012872	pseudogene	Chr16:41827813-41829770 (-)
CBA/J	ENSMUSG00210016934	pseudogene	Chr16:41614780-41616739 (-)
DBA/2J	ENSMUSG00185011215	pseudogene	Chr16:41501239-41503198 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000030605	pseudogene	Chr16:41717629-41719583 (-)
LP/J	ENSMUSG00230029857	pseudogene	Chr16:44083947-44085906 (-)
NOD/ShiLtJ	ENSMUSG00190019316	pseudogene	Chr16:41621845-41623796 (-)
NZO/HlLtJ	ENSMUSG00225028950	pseudogene	Chr16:47175620-47177579 (-)
PWK/PhJ	ENSLUMG00010028387	pseudogene	Chr16:41601244-41603200 (-)
SPRET/EiJ	ENSMSPG00010007698	pseudogene	Chr16:41748517-41750464 (-)
WSB/EiJ	ENSIUOG00005013629	pseudogene	Chr16:41744499-41746440 (-)

Homology

• Gene Tree
  Gm19142
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000116605 (Evidence)
• NCBI Gene
  100418330

Representative Sequences			Length	Strain/Species
genomic	100418330	NCBI Gene Model | MGI Sequence Detail	1391	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;