Gm19140 Pseudogene Detail

Summary

• Symbol
  Gm19140
• Name
  predicted gene, 19140

• Feature Type
  pseudogene
• IDs
  MGI:5011325
  NCBI Gene: 100418322
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:36917534-36917954 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 23.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011325	pseudogene	Chr8:36917386-36917954 (+)
129S1/SvImJ	ENSMUSG00200008239	pseudogene	Chr8:32037542-32037968 (+)
A/J	ENSMUSG00195006152	pseudogene	Chr8:32518213-32518639 (+)
AKR/J	ENSMUSG00220005931	pseudogene	Chr8:32282133-32282559 (+)
BALB/cJ	ENSMUSG00180003250	pseudogene	Chr8:32061504-32061930 (+)
C3H/HeJ	ENSMUSG00175015450	pseudogene	Chr8:32223925-32224351 (+)
C57BL/6NJ	ENSMUSG00215008795	pseudogene	Chr8:31986872-31987292 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005824	pseudogene	Chr8:32177838-32178266 (+)
CBA/J	ENSMUSG00210012843	pseudogene	Chr8:32046924-32047350 (+)
DBA/2J	ENSMUSG00185002440	pseudogene	Chr8:37973176-37973602 (+)
FVB/NJ	ENSMUSG00205002355	pseudogene	Chr8:31259541-31259967 (+)
JF1/MsJ	ENSUMUG00000008960	pseudogene	Chr8:39667308-39667728 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190016131	pseudogene	Chr8:32095397-32095823 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010012846	pseudogene	Chr8:31876087-31876507 (+)
SPRET/EiJ	ENSMSPG00010004632	pseudogene	Chr8:32614313-32614737 (+)
WSB/EiJ	ENSIUOG00005005969	pseudogene	Chr8:32871328-32871754 (+)
WSB/EiJ	ENSIUOG00005006105	pseudogene	Chr8:32863410-32863836 (+)

Homology

• Gene Tree
  Gm19140
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000109977 (Evidence)
• NCBI Gene
  100418322

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109977	Ensembl Gene Model | MGI Sequence Detail	421	C57BL/6J
transcript	ENSMUST00000209790	Ensembl | MGI Sequence Detail	421	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;