Gm19121 Pseudogene Detail

Summary

• Symbol
  Gm19121
• Name
  predicted gene, 19121

• Feature Type
  pseudogene
• IDs
  MGI:5011306
  NCBI Gene: 100418290
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:44867010-44867719 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 24.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011306	pseudogene	Chr9:44867010-44868034 (+)
129S1/SvImJ	ENSMUSG00200018581	pseudogene	Chr9:41943489-41944516 (+)
A/J	ENSMUSG00195023933	pseudogene	Chr9:41702240-41703261 (+)
AKR/J	ENSMUSG00220042155	pseudogene	Chr9:41784764-41785785 (+)
BALB/cJ	ENSMUSG00180031302	pseudogene	Chr9:41813954-41814975 (+)
C3H/HeJ	ENSMUSG00175015605	pseudogene	Chr9:41825851-41826872 (+)
C57BL/6NJ	ENSMUSG00215039309	pseudogene	Chr9:41787342-41788363 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016069	pseudogene	Chr9:41772979-41774000 (+)
CBA/J	ENSMUSG00210017049	pseudogene	Chr9:41868499-41869520 (+)
DBA/2J	ENSMUSG00185012344	pseudogene	Chr9:41940524-41941545 (+)
FVB/NJ	ENSMUSG00205040110	pseudogene	Chr9:42184170-42185191 (+)
JF1/MsJ	ENSUMUG00000043627	pseudogene	Chr9:41983239-41984266 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190024777	pseudogene	Chr9:42019487-42020508 (+)
NZO/HlLtJ	ENSMUSG00225044664	pseudogene	Chr9:42197748-42198769 (+)
PWK/PhJ	ENSLUMG00010021542	pseudogene	Chr9:41942580-41943607 (+)
SPRET/EiJ	ENSMSPG00010011343	pseudogene	Chr9:42704194-42705220 (+)
WSB/EiJ	ENSIUOG00005022163	pseudogene	Chr9:41429189-41430210 (+)

Homology

• Gene Tree
  Gm19121
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000111241 (Evidence)
• NCBI Gene
  100418290

Representative Sequences			Length	Strain/Species
genomic	100418290	NCBI Gene Model | MGI Sequence Detail	710	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;