Gm19100 Pseudogene Detail

Summary

• Symbol
  Gm19100
• Name
  predicted gene, 19100

• Feature Type
  pseudogene
• IDs
  MGI:5011285
  NCBI Gene: 100418251
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:38715911-38716508 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 20.49 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011285	pseudogene	Chr18:38715903-38716508 (+)
129S1/SvImJ	ENSMUSG00200044371	pseudogene	Chr18:35713713-35714318 (+)
A/J	ENSMUSG00195038216	pseudogene	Chr18:35866317-35866922 (+)
AKR/J	ENSMUSG00220017466	pseudogene	Chr18:35834327-35834932 (+)
BALB/cJ	ENSMUSG00180021626	pseudogene	Chr18:36315923-36316528 (+)
C3H/HeJ	ENSMUSG00175042006	pseudogene	Chr18:35831653-35832258 (+)
C57BL/6NJ	ENSMUSG00215028245	pseudogene	Chr18:35586061-35586666 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023971	pseudogene	Chr18:35452996-35453610 (+)
CBA/J	ENSMUSG00210021664	pseudogene	Chr18:35857922-35858527 (+)
DBA/2J	ENSMUSG00185020875	pseudogene	Chr18:35792494-35793099 (+)
FVB/NJ	ENSMUSG00205033162	pseudogene	Chr18:35501894-35502499 (+)
JF1/MsJ	ENSUMUG00000047634	pseudogene	Chr18:35932439-35933049 (+)
LP/J	ENSMUSG00230048843	pseudogene	Chr18:37907798-37908403 (+)
NOD/ShiLtJ	ENSMUSG00190022000	pseudogene	Chr18:35579990-35580595 (+)
NZO/HlLtJ	ENSMUSG00225047551	pseudogene	Chr18:37814591-37815196 (+)
PWK/PhJ	ENSLUMG00010013520	pseudogene	Chr18:36079999-36080609 (+)
SPRET/EiJ	ENSMSPG00010024052	pseudogene	Chr18:36101525-36102124 (+)
WSB/EiJ	ENSIUOG00005007981	pseudogene	Chr18:35574110-35574715 (+)

Homology

• Gene Tree
  Gm19100
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118296 (Evidence)
• NCBI Gene
  100418251

Representative Sequences			Length	Strain/Species
genomic	100418251	NCBI Gene Model | MGI Sequence Detail	598	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;