Gm19096 Pseudogene Detail

Summary

• Symbol
  Gm19096
• Name
  predicted gene, 19096

• Feature Type
  pseudogene
• IDs
  MGI:5011281
  NCBI Gene: 100418243
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:31870597-31871344 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 18.75 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  212 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011281	pseudogene	Chr8:31870579-31871344 (-)
129S1/SvImJ	ENSMUSG00200022283	pseudogene	Chr8:26948502-26949262 (-)
A/J	ENSMUSG00195005934	pseudogene	Chr8:27445544-27446304 (-)
AKR/J	ENSMUSG00220026086	pseudogene	Chr8:27217131-27217891 (-)
BALB/cJ	ENSMUSG00180005827	pseudogene	Chr8:26992561-26993321 (-)
C3H/HeJ	ENSMUSG00175006988	pseudogene	Chr8:27130794-27131554 (-)
C57BL/6NJ	ENSMUSG00215012045	pseudogene	Chr8:26937621-26938386 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024101	pseudogene	Chr8:27126345-27127110 (-)
CBA/J	ENSMUSG00210014513	pseudogene	Chr8:26974543-26975303 (-)
DBA/2J	ENSMUSG00185002402	pseudogene	Chr8:32905196-32905956 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000008593	pseudogene	Chr8:34599553-34600323 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190004747	pseudogene	Chr8:27016403-27017163 (-)
NZO/HlLtJ	ENSMUSG00225021907	pseudogene	Chr8:40150822-40151587 (-)
PWK/PhJ	ENSLUMG00010027586	pseudogene	Chr8:26886179-26886943 (-)
SPRET/EiJ	ENSMSPG00010017164	pseudogene	Chr8:27551473-27552228 (-)
WSB/EiJ	ENSIUOG00005011363	pseudogene	Chr8:27710160-27710920 (-)

Homology

• Gene Tree
  Gm19096
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000109705 (Evidence)
• NCBI Gene
  100418243

Representative Sequences			Length	Strain/Species
genomic	100418243	NCBI Gene Model | MGI Sequence Detail	748	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;