Gm19090 Pseudogene Detail

Summary

• Symbol
  Gm19090
• Name
  predicted gene, 19090

• Feature Type
  pseudogene
• IDs
  MGI:5011275
  NCBI Gene: 100418236
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:119178397-119179170 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 67.22 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011275	pseudogene	Chr10:119178397-119179171 (+)
129S1/SvImJ	ENSMUSG00200026684	pseudogene	Chr10:115529054-115529827 (+)
A/J	ENSMUSG00195022020	pseudogene	Chr10:115928940-115929714 (+)
AKR/J	ENSMUSG00220014832	pseudogene	Chr10:115558094-115558868 (+)
BALB/cJ	ENSMUSG00180016881	pseudogene	Chr10:115941574-115942348 (+)
C3H/HeJ	ENSMUSG00175024938	pseudogene	Chr10:115946505-115947278 (+)
C57BL/6NJ	ENSMUSG00215021419	pseudogene	Chr10:115587894-115588667 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032204	pseudogene	Chr10:114914717-114915490 (+)
CBA/J	ENSMUSG00210021589	pseudogene	Chr10:115783371-115784144 (+)
DBA/2J	ENSMUSG00185009197	pseudogene	Chr10:115892988-115893762 (+)
FVB/NJ	ENSMUSG00205030795	pseudogene	Chr10:115192052-115192826 (+)
JF1/MsJ	ENSUMUG00000020165	pseudogene	Chr10:117162825-117163598 (+)
LP/J	ENSMUSG00230025515	pseudogene	Chr10:117855510-117856284 (+)
NOD/ShiLtJ	ENSMUSG00190018518	pseudogene	Chr10:115994941-115995715 (+)
NZO/HlLtJ	ENSMUSG00225019085	pseudogene	Chr10:122101636-122102409 (+)
PWK/PhJ	ENSLUMG00010014289	pseudogene	Chr10:115563526-115564299 (+)
SPRET/EiJ	ENSMSPG00010016249	pseudogene	Chr10:117494671-117495443 (+)
WSB/EiJ	ENSIUOG00005013830	pseudogene	Chr10:115612873-115613646 (+)

Homology

• Gene Tree
  Gm19090
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm19090
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000112199 (Evidence)
• NCBI Gene
  100418236

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112199	Ensembl Gene Model | MGI Sequence Detail	774	C57BL/6J
transcript	ENSMUST00000218187	Ensembl | MGI Sequence Detail	774	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87