Gm19080 Pseudogene Detail

Summary

• Symbol
  Gm19080
• Name
  predicted gene, 19080

• Feature Type
  pseudogene
• IDs
  MGI:5011265
  NCBI Gene: 100418222
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:140212479-140213028 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 65.30 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011265	pseudogene	Chr3:140212478-140213029 (-)
129S1/SvImJ	ENSMUSG00200002998	pseudogene	Chr3:137014309-137014858 (-)
A/J	ENSMUSG00195004391	pseudogene	Chr3:137109983-137110532 (-)
AKR/J	ENSMUSG00220003756	pseudogene	Chr3:135561651-135562200 (-)
BALB/cJ	ENSMUSG00180012558	pseudogene	Chr3:137023975-137024524 (-)
C3H/HeJ	ENSMUSG00175020690	pseudogene	Chr3:136627110-136627659 (-)
C57BL/6NJ	ENSMUSG00215030085	pseudogene	Chr3:137372201-137372750 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011096	pseudogene	Chr3:133870931-133871455 (-)
CAST/EiJ	ENSTCUG00005030069	pseudogene	Chr3:137726438-137726989 (-)
CBA/J	ENSMUSG00210032844	pseudogene	Chr3:137247719-137248260 (-)
DBA/2J	ENSMUSG00185003648	pseudogene	Chr3:137860525-137861066 (-)
FVB/NJ	ENSMUSG00205024515	pseudogene	Chr3:136156717-136157266 (-)
JF1/MsJ	ENSUMUG00000005149	pseudogene	Chr3:136652739-136653288 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190005001	pseudogene	Chr3:138245178-138245727 (-)
NZO/HlLtJ	ENSMUSG00225006333	pseudogene	Chr3:142291498-142292047 (-)
PWK/PhJ	ENSLUMG00010021114	pseudogene	Chr3:136569716-136570257 (-)
SPRET/EiJ	ENSMSPG00010015022	pseudogene	Chr3:137778950-137779500 (-)
WSB/EiJ	ENSIUOG00005019284	pseudogene	Chr3:137413566-137414107 (-)

Homology

• Gene Tree
  Gm19080
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm19080
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000104596 (Evidence)
• NCBI Gene
  100418222

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104596	Ensembl Gene Model | MGI Sequence Detail	550	C57BL/6J
transcript	ENSMUST00000196082	Ensembl | MGI Sequence Detail	550	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426