Gm19052 Pseudogene Detail

Summary

• Symbol
  Gm19052
• Name
  predicted gene, 19052

• Feature Type
  pseudogene
• IDs
  MGI:5011237
  NCBI Gene: 100418170
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:10236706-10237622 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 4.93 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011237	pseudogene	Chr18:10236685-10237821 (+)
129S1/SvImJ	ENSMUSG00200025888	pseudogene	Chr18:7173271-7189059 (+)
A/J	ENSMUSG00195009467	pseudogene	Chr18:7329276-7351170 (+)
AKR/J	ENSMUSG00220019751	pseudogene	Chr18:7320469-7342365 (+)
BALB/cJ	ENSMUSG00180005476	pseudogene	Chr18:7776425-7798304 (+)
C3H/HeJ	ENSMUSG00175007772	pseudogene	Chr18:7311772-7333645 (+)
C57BL/6NJ	ENSMUSG00215019852	pseudogene	Chr18:7053613-7075493 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017566	pseudogene	Chr18:7161913-7177696 (+)
CBA/J	ENSMUSG00210022015	pseudogene	Chr18:7324687-7346560 (+)
DBA/2J	ENSMUSG00185031841	pseudogene	Chr18:7331933-7353809 (+)
FVB/NJ	ENSMUSG00205035200	pseudogene	Chr18:7111126-7133002 (+)
JF1/MsJ	ENSUMUG00000040377	pseudogene	Chr18:7413075-7428870 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190010273	pseudogene	Chr18:7104694-7126570 (+)
NZO/HlLtJ	ENSMUSG00225034255	pseudogene	Chr18:9315389-9337265 (+)
PWK/PhJ	ENSLUMG00010010293	pseudogene	Chr18:7603437-7619244 (+)
SPRET/EiJ	ENSMSPG00010011950	pseudogene	Chr18:7243502-7265572 (+)
WSB/EiJ	ENSIUOG00005028214	pseudogene	Chr18:7185590-7207465 (+)

Homology

• Gene Tree
  Gm19052
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000117492 (Evidence)
• NCBI Gene
  100418170

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117492	Ensembl Gene Model | MGI Sequence Detail	917	C57BL/6J
transcript	ENSMUST00000234629	Ensembl | MGI Sequence Detail	917	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;