Gm19035 Pseudogene Detail

Summary

• Symbol
  Gm19035
• Name
  predicted gene, 19035

• Feature Type
  pseudogene
• IDs
  MGI:5011220
  NCBI Gene: 100418149
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:37214552-37215510 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 19.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  190 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011220	pseudogene	Chr18:37214552-37215510 (+)
129S1/SvImJ	ENSMUSG00200045513	pseudogene	Chr18:34212377-34214844 (+)
A/J	ENSMUSG00195037702	pseudogene	Chr18:34365350-34367809 (+)
AKR/J	ENSMUSG00220017229	pseudogene	Chr18:34355523-34357994 (+)
BALB/cJ	ENSMUSG00180022398	pseudogene	Chr18:34814993-34817450 (+)
C3H/HeJ	ENSMUSG00175040955	pseudogene	Chr18:34336987-34339454 (+)
C57BL/6NJ	ENSMUSG00215029582	pseudogene	Chr18:34082542-34085007 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036848	pseudogene	Chr18:34334398-34337324 (+)
CAST/EiJ	ENSTCUG00005025690	pseudogene	Chr18:33972257-33974734 (+)
CBA/J	ENSMUSG00210021492	pseudogene	Chr18:34356997-34359458 (+)
DBA/2J	ENSMUSG00185020475	pseudogene	Chr18:34291621-34294080 (+)
FVB/NJ	ENSMUSG00205036164	pseudogene	Chr18:34017312-34019779 (+)
JF1/MsJ	ENSUMUG00000046519	pseudogene	Chr18:34433554-34436024 (+)
LP/J	ENSMUSG00230048750	pseudogene	Chr18:36409068-36411535 (+)
NOD/ShiLtJ	ENSMUSG00190024110	pseudogene	Chr18:34085309-34087770 (+)
NZO/HlLtJ	ENSMUSG00225047466	pseudogene	Chr18:36307093-36309550 (+)
PWK/PhJ	ENSLUMG00010013799	pseudogene	Chr18:34592699-34595161 (+)
SPRET/EiJ	ENSMSPG00010024370	pseudogene	Chr18:34654730-34657264 (+)
WSB/EiJ	ENSIUOG00005008536	pseudogene	Chr18:34069154-34071582 (+)

Homology

• Gene Tree
  Gm19035
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  1
• Targeted
  1
• Genomic Mutations
  2 involving Gm19035
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000102232 (Evidence)
• NCBI Gene
  100418149

Representative Sequences			Length	Strain/Species
genomic	100418149	NCBI Gene Model | MGI Sequence Detail	959	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:244163 Hasegawa S, et al., Distinct and Cooperative Functions for the Protocadherin-alpha, -beta and -gamma Clusters in Neuronal Survival and Axon Targeting. Front Mol Neurosci. 2016;9:155
• Latest
  J:313451 Xu L, et al., Abnormal neocortex arealization and Sotos-like syndrome-associated behavior in Setd2 mutant mice. Sci Adv. 2021 Jan;7(1)