Gm19033 Pseudogene Detail

Summary

• Symbol
  Gm19033
• Name
  predicted gene, 19033

• Feature Type
  pseudogene
• IDs
  MGI:5011218
  NCBI Gene: 100418145
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:106965279-106966242 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 56.28 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011218	pseudogene	Chr7:106964977-106966249 (+)
129S1/SvImJ	ENSMUSG00200034022	pseudogene	Chr7:93494341-93495304 (+)
A/J	ENSMUSG00195054795	pseudogene	Chr7:97997281-97998244 (+)
AKR/J	ENSMUSG00220052311	pseudogene	Chr7:91377595-91378558 (+)
BALB/cJ	ENSMUSG00180045562	pseudogene	Chr7:94676677-94677640 (+)
C3H/HeJ	ENSMUSG00175051785	pseudogene	Chr7:95319542-95320505 (+)
C57BL/6NJ	ENSMUSG00215051232	pseudogene	Chr7:94608392-94609355 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053239	pseudogene	Chr7:97985182-97986145 (+)
CBA/J	ENSMUSG00210048612	pseudogene	Chr7:95145115-95146078 (+)
DBA/2J	ENSMUSG00185057081	pseudogene	Chr7:99497367-99498330 (+)
FVB/NJ	ENSMUSG00205049246	pseudogene	Chr7:95070085-95071048 (+)
JF1/MsJ	ENSUMUG00000050573	pseudogene	Chr7:104486796-104487759 (+)
LP/J	ENSMUSG00230048928	pseudogene	Chr7:105599121-105600084 (+)
NOD/ShiLtJ	ENSMUSG00190048027	pseudogene	Chr7:95289881-95290844 (+)
NZO/HlLtJ	ENSMUSG00225019361	pseudogene	Chr7:103811818-103812781 (+)
PWK/PhJ	ENSLUMG00010041231	pseudogene	Chr7:93664131-93665094 (+)
SPRET/EiJ	ENSMSPG00010043122	pseudogene	Chr7:94732724-94733687 (+)
WSB/EiJ	ENSIUOG00005050080	pseudogene	Chr7:95918378-95919341 (+)

Homology

• Gene Tree
  Gm19033
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm19033
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000109078 (Evidence)
• NCBI Gene
  100418145

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109078	Ensembl Gene Model | MGI Sequence Detail	964	C57BL/6J
transcript	ENSMUST00000208516	Ensembl | MGI Sequence Detail	964	Not Applicable

References

• Summaries
  All 12

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67