Gm18997 Pseudogene Detail

Summary

• Symbol
  Gm18997
• Name
  predicted gene, 18997

• Feature Type
  pseudogene
• IDs
  MGI:5011182
  NCBI Gene: 100418097
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:14604819-14605634 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 4.25 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011182	pseudogene	Chr9:14604819-14605640 (+)
129S1/SvImJ	ENSMUSG00200049471	pseudogene	Chr9:11506651-11507468 (+)
A/J	ENSMUSG00195040799	pseudogene	Chr9:11392190-11393015 (+)
AKR/J	ENSMUSG00220035895	pseudogene	Chr9:11369650-11370467 (+)
BALB/cJ	ENSMUSG00180044928	pseudogene	Chr9:11516097-11516918 (+)
C3H/HeJ	ENSMUSG00175045882	pseudogene	Chr9:11463138-11463959 (+)
C57BL/6NJ	ENSMUSG00215036762	pseudogene	Chr9:11457723-11458544 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035119	pseudogene	Chr9:11483459-11484309 (+)
CBA/J	ENSMUSG00210043961	pseudogene	Chr9:11494108-11494921 (+)
DBA/2J	ENSMUSG00185027933	pseudogene	Chr9:11582815-11583636 (+)
FVB/NJ	ENSMUSG00205042973	pseudogene	Chr9:11566811-11567628 (+)
JF1/MsJ	ENSUMUG00000047430	pseudogene	Chr9:11558987-11559822 (+)
LP/J	ENSMUSG00230044526	pseudogene	Chr9:12004778-12005591 (+)
NOD/ShiLtJ	ENSMUSG00190042953	pseudogene	Chr9:11493353-11494170 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010048927	pseudogene	Chr9:11489016-11489871 (+)
SPRET/EiJ	ENSMSPG00010025712	pseudogene	Chr9:11673525-11674349 (+)
WSB/EiJ	ENSIUOG00005046687	pseudogene	Chr9:11156039-11156828 (+)

Homology

• Gene Tree
  Gm18997
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000111483 (Evidence)
• NCBI Gene
  100418097

Representative Sequences			Length	Strain/Species
genomic	100418097	NCBI Gene Model | MGI Sequence Detail	816	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;