Gm18994 Pseudogene Detail

Summary

• Symbol
  Gm18994
• Name
  predicted gene, 18994

• Feature Type
  pseudogene
• IDs
  MGI:5011179
  NCBI Gene: 100418089
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:35733750-35734768 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 14.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011179	pseudogene	Chr15:35733743-35735289 (+)
129S1/SvImJ	ENSMUSG00200027606	pseudogene	Chr15:32756803-32757821 (+)
A/J	ENSMUSG00195037191	pseudogene	Chr15:32673654-32674672 (+)
AKR/J	ENSMUSG00220030418	pseudogene	Chr15:32587606-32588624 (+)
BALB/cJ	ENSMUSG00180034342	pseudogene	Chr15:32636903-32637921 (+)
C3H/HeJ	ENSMUSG00175029108	pseudogene	Chr15:32838120-32839138 (+)
C57BL/6NJ	ENSMUSG00215022766	pseudogene	Chr15:32645978-32646996 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010883	pseudogene	Chr15:32672901-32673919 (+)
CBA/J	ENSMUSG00210018391	pseudogene	Chr15:32748622-32749640 (+)
DBA/2J	ENSMUSG00185035651	pseudogene	Chr15:32733432-32734450 (+)
FVB/NJ	ENSMUSG00205034955	pseudogene	Chr15:32645120-32646138 (+)
JF1/MsJ	ENSUMUG00000037338	pseudogene	Chr15:32632204-32633222 (+)
LP/J	ENSMUSG00230013227	pseudogene	Chr15:36138158-36139176 (+)
NOD/ShiLtJ	ENSMUSG00190031566	pseudogene	Chr15:32718639-32719657 (+)
NZO/HlLtJ	ENSMUSG00225032128	pseudogene	Chr15:36424836-36425854 (+)
PWK/PhJ	ENSLUMG00010032644	pseudogene	Chr15:32806684-32807702 (+)
SPRET/EiJ	ENSMSPG00010014279	pseudogene	Chr15:33426854-33427866 (+)
WSB/EiJ	ENSIUOG00005033973	pseudogene	Chr15:32759192-32760210 (+)

Homology

• Gene Tree
  Gm18994
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm18994
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000115040 (Evidence)
• NCBI Gene
  100418089

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115040	Ensembl Gene Model | MGI Sequence Detail	1019	C57BL/6J
transcript	ENSMUST00000228224	Ensembl | MGI Sequence Detail	1019	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6