Gm18992 Pseudogene Detail

Summary

• Symbol
  Gm18992
• Name
  predicted gene, 18992

• Feature Type
  pseudogene
• IDs
  MGI:5011177
  NCBI Gene: 100418086
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:65702733-65703285 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 34.90 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011177	pseudogene	Chr17:65702733-65703287 (-)
129S1/SvImJ	ENSMUSG00200039157	pseudogene	Chr17:61051916-61052468 (-)
A/J	ENSMUSG00195018794	pseudogene	Chr17:62380941-62381493 (-)
AKR/J	ENSMUSG00220019131	pseudogene	Chr17:61466290-61466842 (-)
BALB/cJ	ENSMUSG00180022447	pseudogene	Chr17:62123498-62124050 (-)
C3H/HeJ	ENSMUSG00175032728	pseudogene	Chr17:61441659-61442211 (-)
C57BL/6NJ	ENSMUSG00215031056	pseudogene	Chr17:61090785-61091337 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028000	pseudogene	Chr17:62057551-62058103 (-)
CBA/J	ENSMUSG00210029736	pseudogene	Chr17:61239008-61239560 (-)
DBA/2J	ENSMUSG00185023512	pseudogene	Chr17:64075472-64076024 (-)
FVB/NJ	ENSMUSG00205020353	pseudogene	Chr17:61821505-61822057 (-)
JF1/MsJ	ENSUMUG00000042763	pseudogene	Chr17:63742155-63742702 (-)
LP/J	ENSMUSG00230017497	pseudogene	Chr17:65070185-65070737 (-)
NOD/ShiLtJ	ENSMUSG00190041627	pseudogene	Chr17:61209962-61210514 (-)
NZO/HlLtJ	ENSMUSG00225026253	pseudogene	Chr17:67345999-67346551 (-)
PWK/PhJ	ENSLUMG00010009808	pseudogene	Chr17:61015782-61016334 (-)
SPRET/EiJ	ENSMSPG00010018802	pseudogene	Chr17:61394576-61395123 (-)
WSB/EiJ	ENSIUOG00005034408	pseudogene	Chr17:62071100-62071646 (-)

Homology

• Gene Tree
  Gm18992
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000117012 (Evidence)
• NCBI Gene
  100418086

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117012	Ensembl Gene Model | MGI Sequence Detail	553	C57BL/6J
transcript	ENSMUST00000232744	Ensembl | MGI Sequence Detail	553	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;