Gm18991 Pseudogene Detail

Summary

• Symbol
  Gm18991
• Name
  predicted gene, 18991

• Feature Type
  pseudogene
• IDs
  MGI:5011176
  NCBI Gene: 100418085
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:11788621-11789363 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 5.73 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  152 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011176	pseudogene	Chr8:11788621-11789366 (+)
129S1/SvImJ	ENSMUSG00200013594	pseudogene	Chr8:8670599-8671344 (+)
A/J	ENSMUSG00195010777	pseudogene	Chr8:9030290-9031035 (+)
AKR/J	ENSMUSG00220011195	pseudogene	Chr8:8759544-8760289 (+)
BALB/cJ	ENSMUSG00180005115	pseudogene	Chr8:8669380-8670125 (+)
C3H/HeJ	ENSMUSG00175008560	pseudogene	Chr8:8829304-8830049 (+)
C57BL/6NJ	ENSMUSG00215009375	pseudogene	Chr8:8703638-8704383 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021619	pseudogene	Chr8:8667042-8667789 (+)
CBA/J	ENSMUSG00210011216	pseudogene	Chr8:8663175-8663920 (+)
DBA/2J	ENSMUSG00185004277	pseudogene	Chr8:8795943-8796688 (+)
FVB/NJ	ENSMUSG00205005881	pseudogene	Chr8:8688552-8689297 (+)
JF1/MsJ	ENSUMUG00000044464	pseudogene	Chr8:8818836-8819585 (+)
LP/J	ENSMUSG00230023830	pseudogene	Chr8:10978384-10979133 (+)
NOD/ShiLtJ	ENSMUSG00190011447	pseudogene	Chr8:8788094-8788839 (+)
NZO/HlLtJ	ENSMUSG00225019127	pseudogene	Chr8:18830637-18831382 (+)
PWK/PhJ	ENSLUMG00010011439	pseudogene	Chr8:8740958-8741707 (+)
SPRET/EiJ	ENSMSPG00010018982	pseudogene	Chr8:8866138-8866886 (+)
WSB/EiJ	ENSIUOG00005005119	pseudogene	Chr8:8679791-8680538 (+)

Homology

• Gene Tree
  Gm18991
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110394 (Evidence)
• NCBI Gene
  100418085

Representative Sequences			Length	Strain/Species
genomic	100418085	NCBI Gene Model | MGI Sequence Detail	743	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;