Gm18984 Pseudogene Detail

Summary

• Symbol
  Gm18984
• Name
  predicted gene, 18984

• Feature Type
  pseudogene
• IDs
  MGI:5011169
  NCBI Gene: 100418076
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:7481405-7482220 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 2.08 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011169	pseudogene	Chr1:7480903-7482220 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0009961	pseudogene	Chr1:4693863-4695039 (+)
AKR/J	MGP_AKRJ_G0009944	pseudogene	Chr1:4570994-4572907 (+)
BALB/cJ	MGP_BALBcJ_G0009949	pseudogene	Chr1:4467842-4472682 (+)
C3H/HeJ	MGP_C3HHeJ_G0009877	pseudogene	Chr1:4568706-4569882 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013273	pseudogene	Chr5:166845-168207 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009751	pseudogene	Chr12:5265797-5266973 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0009853	pseudogene	Chr1:4995194-4998583 (+)
DBA/2J	MGP_DBA2J_G0009877	pseudogene	Chr1:4409468-4410612 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0009974	pseudogene	Chr1:4766408-4768992 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009863	pseudogene	Chr1:5307629-5310533 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0010642	pseudogene	Chr14:11264141-11265636 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012137	pseudogene	Chr5:201876-203245 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm18984
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000103498 (Evidence)
• NCBI Gene
  100418076

Representative Sequences			Length	Strain/Species
genomic	100418076	NCBI Gene Model | MGI Sequence Detail	816	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;