Gm18942 Pseudogene Detail

Summary

• Symbol
  Gm18942
• Name
  predicted gene, 18942

• Feature Type
  pseudogene
• IDs
  MGI:5011127
  NCBI Gene: 100418004
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:18211869-18212989 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 7.61 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  210 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011127	pseudogene	Chr10:18211869-18212989 (-)
129S1/SvImJ	ENSMUSG00200010361	pseudogene	Chr10:15215384-15216504 (-)
A/J	ENSMUSG00195006785	pseudogene	Chr10:15225536-15226656 (-)
AKR/J	ENSMUSG00220010272	pseudogene	Chr10:15136166-15137286 (-)
BALB/cJ	ENSMUSG00180015842	pseudogene	Chr10:15349888-15351008 (-)
C3H/HeJ	ENSMUSG00175020652	pseudogene	Chr10:15369709-15370829 (-)
C57BL/6NJ	ENSMUSG00215003938	pseudogene	Chr10:15162721-15163841 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031070	pseudogene	Chr10:15126370-15127502 (-)
CBA/J	ENSMUSG00210015846	pseudogene	Chr10:15307364-15308484 (-)
DBA/2J	ENSMUSG00185008203	pseudogene	Chr10:15291890-15293010 (-)
FVB/NJ	ENSMUSG00205019433	pseudogene	Chr10:15194130-15195250 (-)
JF1/MsJ	ENSUMUG00000013862	pseudogene	Chr10:15355270-15356395 (-)
LP/J	ENSMUSG00230018770	pseudogene	Chr10:16948348-16949468 (-)
NOD/ShiLtJ	ENSMUSG00190011050	pseudogene	Chr10:15276515-15277649 (-)
NZO/HlLtJ	ENSMUSG00225030759	pseudogene	Chr10:21421634-21422754 (-)
PWK/PhJ	ENSLUMG00010015481	pseudogene	Chr10:15081146-15082271 (-)
SPRET/EiJ	ENSMSPG00010011038	pseudogene	Chr10:15706753-15707863 (-)
WSB/EiJ	ENSIUOG00005023600	pseudogene	Chr10:14889333-14890453 (-)

Homology

• Gene Tree
  Gm18942
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18942
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000111313 (Evidence)
• NCBI Gene
  100418004

Representative Sequences			Length	Strain/Species
genomic	100418004	NCBI Gene Model | MGI Sequence Detail	1121	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87