Gm18936 Pseudogene Detail

Summary

• Symbol
  Gm18936
• Name
  predicted gene, 18936

• Feature Type
  pseudogene
• IDs
  MGI:5011121
  NCBI Gene: 100417987
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:38376028-38376609 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 33.02 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011121	pseudogene	Chr19:38375411-38376609 (-)
129S1/SvImJ	ENSMUSG00200032303	pseudogene	Chr19:35163169-35164309 (-)
A/J	ENSMUSG00195012131	pseudogene	Chr19:35262775-35263915 (-)
AKR/J	ENSMUSG00220018839	pseudogene	Chr19:35144269-35145409 (-)
BALB/cJ	ENSMUSG00180033598	pseudogene	Chr19:35590767-35591907 (-)
C3H/HeJ	ENSMUSG00175041271	pseudogene	Chr19:35024300-35025440 (-)
C57BL/6NJ	ENSMUSG00215028938	pseudogene	Chr19:35041953-35043093 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015635	pseudogene	Chr19:34709110-34710250 (-)
CBA/J	ENSMUSG00210037159	pseudogene	Chr19:35103537-35104677 (-)
DBA/2J	ENSMUSG00185034175	pseudogene	Chr19:35623697-35624837 (-)
FVB/NJ	ENSMUSG00205007915	pseudogene	Chr19:34867699-34868839 (-)
JF1/MsJ	ENSUMUG00000046192	pseudogene	Chr19:35765694-35766827 (-)
LP/J	ENSMUSG00230036463	pseudogene	Chr19:36434950-36436090 (-)
NOD/ShiLtJ	ENSMUSG00190011890	pseudogene	Chr19:35000963-35002103 (-)
NZO/HlLtJ	ENSMUSG00225029613	pseudogene	Chr19:39984822-39985962 (-)
PWK/PhJ	ENSLUMG00010001426	pseudogene	Chr19:35146601-35147731 (-)
SPRET/EiJ	ENSMSPG00010024446	pseudogene	Chr19:34878088-34879222 (-)
WSB/EiJ	ENSIUOG00005040271	pseudogene	Chr19:34514719-34515859 (-)

Homology

• Gene Tree
  Gm18936
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118335 (Evidence)
• NCBI Gene
  100417987

Representative Sequences			Length	Strain/Species
genomic	100417987	NCBI Gene Model | MGI Sequence Detail	582	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;