Gm18901 Pseudogene Detail

Summary

• Symbol
  Gm18901
• Name
  predicted gene, 18901

• Feature Type
  pseudogene
• IDs
  MGI:5011086
  NCBI Gene: 100417925
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:57513187-57514539 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 30.93 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  168 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011086	pseudogene	Chr5:57513177-57514620 (+)
129S1/SvImJ	ENSMUSG00200000079	pseudogene	Chr5:53065335-53066778 (+)
A/J	ENSMUSG00195000526	pseudogene	Chr5:52458133-52459576 (+)
AKR/J	ENSMUSG00220007195	pseudogene	Chr5:52523786-52525229 (+)
BALB/cJ	ENSMUSG00180006619	pseudogene	Chr5:52216372-52217815 (+)
C3H/HeJ	ENSMUSG00175001724	pseudogene	Chr5:54258672-54260115 (+)
C57BL/6NJ	ENSMUSG00215002828	pseudogene	Chr5:53015649-53017092 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011608	pseudogene	Chr5:51112100-51113512 (+)
CAST/EiJ	ENSTCUG00005000700	pseudogene	Chr5:52365516-52366972 (+)
CBA/J	ENSMUSG00210000332	pseudogene	Chr5:53217255-53218698 (+)
DBA/2J	ENSMUSG00185000137	pseudogene	Chr5:55079640-55081083 (+)
FVB/NJ	ENSMUSG00205011730	pseudogene	Chr5:52068955-52070398 (+)
JF1/MsJ	ENSUMUG00000001192	pseudogene	Chr5:59665701-59667161 (+)
LP/J	ENSMUSG00230011002	pseudogene	Chr5:59741178-59742621 (+)
NOD/ShiLtJ	ENSMUSG00190000719	pseudogene	Chr5:52149201-52150644 (+)
NZO/HlLtJ	ENSMUSG00225003003	pseudogene	Chr5:64870194-64871637 (+)
PWK/PhJ	ENSLUMG00010004525	pseudogene	Chr5:52274355-52275811 (+)
SPRET/EiJ	ENSMSPG00010004130	pseudogene	Chr5:53891302-53892751 (+)
WSB/EiJ	ENSIUOG00005000140	pseudogene	Chr5:55110899-55112338 (+)

Homology

• Gene Tree
  Gm18901
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm18901
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000105291 (Evidence)
• NCBI Gene
  100417925

Representative Sequences			Length	Strain/Species
genomic	100417925	NCBI Gene Model | MGI Sequence Detail	1353	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17