Gm18876 Pseudogene Detail

Summary

• Symbol
  Gm18876
• Name
  predicted gene, 18876

• Feature Type
  pseudogene
• IDs
  MGI:5011061
  NCBI Gene: 100417881
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:86476547-86478395 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 42.99 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011061	pseudogene	Chr10:86476547-86478395 (+)
129S1/SvImJ	ENSMUSG00200029752	pseudogene	Chr10:82973280-82975128 (+)
A/J	ENSMUSG00195022294	pseudogene	Chr10:83418392-83420240 (+)
AKR/J	ENSMUSG00220023354	pseudogene	Chr10:83020669-83022517 (+)
BALB/cJ	ENSMUSG00180032681	pseudogene	Chr10:83421503-83423351 (+)
C3H/HeJ	ENSMUSG00175022991	pseudogene	Chr10:83311115-83312963 (+)
C57BL/6NJ	ENSMUSG00215032193	pseudogene	Chr10:82967939-82969787 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034832	pseudogene	Chr10:82727418-82729266 (+)
CBA/J	ENSMUSG00210034812	pseudogene	Chr10:83152513-83154361 (+)
DBA/2J	ENSMUSG00185044863	pseudogene	Chr10:83370018-83371866 (+)
FVB/NJ	ENSMUSG00205022847	pseudogene	Chr10:83028518-83030366 (+)
JF1/MsJ	ENSUMUG00000029450	pseudogene	Chr10:84725618-84727466 (+)
LP/J	ENSMUSG00230018308	pseudogene	Chr10:85255935-85257783 (+)
NOD/ShiLtJ	ENSMUSG00190019296	pseudogene	Chr10:83403964-83405812 (+)
NZO/HlLtJ	ENSMUSG00225053616	pseudogene	Chr10:89527176-89529024 (+)
PWK/PhJ	ENSLUMG00010024115	pseudogene	Chr10:83002078-83003926 (+)
SPRET/EiJ	ENSMSPG00010036373	pseudogene	Chr10:84492142-84494003 (+)
WSB/EiJ	ENSIUOG00005037213	pseudogene	Chr10:83098042-83099890 (+)

Homology

• Gene Tree
  Gm18876
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18876
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000112098 (Evidence)
• NCBI Gene
  100417881

Representative Sequences			Length	Strain/Species
genomic	100417881	NCBI Gene Model | MGI Sequence Detail	1849	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87