Gm18860 Pseudogene Detail

Summary

• Symbol
  Gm18860
• Name
  predicted gene, 18860

• Feature Type
  pseudogene
• IDs
  MGI:5011045
  NCBI Gene: 100417840
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:72156849-72157612 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 34.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011045	pseudogene	Chr8:72156649-72157680 (-)
129S1/SvImJ	ENSMUSG00200033046	pseudogene	Chr8:66753712-66754475 (-)
A/J	ENSMUSG00195017819	pseudogene	Chr8:67202648-67203411 (-)
AKR/J	ENSMUSG00220025883	pseudogene	Chr8:67238708-67239471 (-)
BALB/cJ	ENSMUSG00180029740	pseudogene	Chr8:66936724-66937487 (-)
C3H/HeJ	ENSMUSG00175022884	pseudogene	Chr8:67138955-67139718 (-)
C57BL/6NJ	ENSMUSG00215039227	pseudogene	Chr8:66714972-66715735 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041031	pseudogene	Chr8:66744075-66744839 (-)
CBA/J	ENSMUSG00210035822	pseudogene	Chr8:66982546-66983309 (-)
DBA/2J	ENSMUSG00185013452	pseudogene	Chr8:73142187-73142950 (-)
FVB/NJ	ENSMUSG00205044117	pseudogene	Chr8:66234526-66235289 (-)
JF1/MsJ	ENSUMUG00000042884	pseudogene	Chr8:75410871-75411635 (-)
LP/J	ENSMUSG00230034842	pseudogene	Chr8:76753850-76754613 (-)
NOD/ShiLtJ	ENSMUSG00190032025	pseudogene	Chr8:66898114-66898877 (-)
NZO/HlLtJ	ENSMUSG00225048754	pseudogene	Chr8:80153781-80154544 (-)
PWK/PhJ	ENSLUMG00010035975	pseudogene	Chr8:66877107-66877870 (-)
SPRET/EiJ	ENSMSPG00010041948	pseudogene	Chr8:68558225-68558982 (-)
WSB/EiJ	ENSIUOG00005026783	pseudogene	Chr8:67755569-67756332 (-)

Homology

• Gene Tree
  Gm18860
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18860
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110569 (Evidence)
• NCBI Gene
  100417840

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110569	Ensembl Gene Model | MGI Sequence Detail	764	C57BL/6J
transcript	ENSMUST00000212029	Ensembl | MGI Sequence Detail	764	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;