Gm18859 Pseudogene Detail

Summary

• Symbol
  Gm18859
• Name
  predicted gene, 18859

• Feature Type
  pseudogene
• IDs
  MGI:5011044
  NCBI Gene: 100417838
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:17995531-17996355 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 6.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011044	pseudogene	Chr13:17995507-17996359 (+)
129S1/SvImJ	ENSMUSG00200014810	pseudogene	Chr13:15234515-15235339 (+)
A/J	ENSMUSG00195040644	pseudogene	Chr13:14343756-14344580 (+)
AKR/J	ENSMUSG00220033646	pseudogene	Chr13:14284017-14284840 (+)
BALB/cJ	ENSMUSG00180036186	pseudogene	Chr13:14698392-14699216 (+)
C3H/HeJ	ENSMUSG00175035881	pseudogene	Chr13:14800161-14800985 (+)
C57BL/6NJ	ENSMUSG00215035076	pseudogene	Chr13:14751751-14752575 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013915	pseudogene	Chr13:14845239-14846070 (+)
CBA/J	ENSMUSG00210032349	pseudogene	Chr13:14660093-14660917 (+)
DBA/2J	ENSMUSG00185013906	pseudogene	Chr13:15361439-15362263 (+)
FVB/NJ	ENSMUSG00205051497	pseudogene	Chr13:14521386-14522210 (+)
JF1/MsJ	ENSUMUG00000021523	pseudogene	Chr13:15099788-15100611 (+)
LP/J	ENSMUSG00230037253	pseudogene	Chr13:24763860-24764684 (+)
NOD/ShiLtJ	ENSMUSG00190023369	pseudogene	Chr13:14625165-14625989 (+)
NZO/HlLtJ	ENSMUSG00225032728	pseudogene	Chr13:18514792-18515616 (+)
PWK/PhJ	ENSLUMG00010030271	pseudogene	Chr13:14068762-14069585 (+)
SPRET/EiJ	ENSMSPG00010020531	pseudogene	Chr13:13726837-13727658 (+)
WSB/EiJ	ENSIUOG00005034724	pseudogene	Chr13:13960069-13960893 (+)

Homology

• Gene Tree
  Gm18859
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081285 (Evidence)
• NCBI Gene
  100417838

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081285	Ensembl Gene Model | MGI Sequence Detail	825	C57BL/6J
transcript	ENSMUST00000118792	Ensembl | MGI Sequence Detail	825	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;