Gm18850 Pseudogene Detail

Summary

• Symbol
  Gm18850
• Name
  predicted gene, 18850

• Feature Type
  pseudogene
• IDs
  MGI:5011035
  NCBI Gene: 100417827
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:11421756-11422143 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 7.17 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011035	pseudogene	Chr7:11421756-11422993 (-)
129S1/SvImJ	ENSMUSG00200041739	pseudogene	Chr7:5486992-5487379 (-)
A/J	ENSMUSG00195053249	pseudogene	Chr7:5175287-5175674 (-)
AKR/J	ENSMUSG00220027290	pseudogene	Chr7:4639040-4639427 (-)
BALB/cJ	ENSMUSG00180051718	pseudogene	Chr7:5134117-5134504 (-)
C3H/HeJ	ENSMUSG00175050105	pseudogene	Chr7:5466756-5467143 (-)
C57BL/6NJ	ENSMUSG00215044433	pseudogene	Chr7:5798063-5798450 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030825	pseudogene	Chr7:5223728-5224115 (-)
CBA/J	ENSMUSG00210047739	pseudogene	Chr7:4762274-4762661 (-)
DBA/2J	ENSMUSG00185045858	pseudogene	Chr7:8295088-8295475 (-)
FVB/NJ	ENSMUSG00205049534	pseudogene	Chr7:5478071-5478458 (-)
JF1/MsJ	ENSUMUG00000053726	pseudogene	Chr7:7933329-7933716 (-)
LP/J	ENSMUSG00230048142	pseudogene	Chr7:12477435-12477822 (-)
NOD/ShiLtJ	ENSMUSG00190050595	pseudogene	Chr7:5333724-5334111 (-)
NZO/HlLtJ	ENSMUSG00225022049	pseudogene	Chr7:9958687-9959074 (-)
PWK/PhJ	ENSLUMG00010049929	pseudogene	Chr7:9038353-9038740 (-)
SPRET/EiJ	ENSMSPG00010050263	pseudogene	Chr7:5229365-5229397 (-)
WSB/EiJ	ENSIUOG00005053138	pseudogene	Chr7:5355110-5355497 (-)

Homology

• Gene Tree
  Gm18850
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000109883 (Evidence)
• NCBI Gene
  100417827

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109883	Ensembl Gene Model | MGI Sequence Detail	388	C57BL/6J
transcript	ENSMUST00000211578	Ensembl | MGI Sequence Detail	388	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;