Gm18832 Pseudogene Detail

Summary

• Symbol
  Gm18832
• Name
  predicted gene, 18832

• Feature Type
  pseudogene
• IDs
  MGI:5011017
  NCBI Gene: 100417795
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:86992182-86992922 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 56.82 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  216 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5011017	pseudogene	Chr17:86992176-86992924 (-)
129S1/SvImJ	ENSMUSG00200023223	pseudogene	Chr17:82397358-82398106 (-)
A/J	ENSMUSG00195029614	pseudogene	Chr17:83777122-83777849 (-)
AKR/J	ENSMUSG00220016611	pseudogene	Chr17:82727933-82728681 (-)
BALB/cJ	ENSMUSG00180026369	pseudogene	Chr17:83449317-83450044 (-)
C3H/HeJ	ENSMUSG00175007211	pseudogene	Chr17:82715175-82715902 (-)
C57BL/6NJ	ENSMUSG00215024133	pseudogene	Chr17:82435536-82436284 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011884	pseudogene	Chr17:83270921-83271673 (-)
CBA/J	ENSMUSG00210022316	pseudogene	Chr17:82573909-82574636 (-)
DBA/2J	ENSMUSG00185020627	pseudogene	Chr17:85393342-85394069 (-)
FVB/NJ	ENSMUSG00205006057	pseudogene	Chr17:83201995-83202743 (-)
JF1/MsJ	ENSUMUG00000016436	pseudogene	Chr17:85129707-85130461 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190010079	pseudogene	Chr17:82471342-82472090 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010032271	pseudogene	Chr17:82338406-82339133 (-)
SPRET/EiJ	ENSMSPG00010020564	pseudogene	Chr17:82929045-82929225 (-)
WSB/EiJ	ENSIUOG00005022787	pseudogene	Chr17:83394861-83395588 (-)

Homology

• Gene Tree
  Gm18832
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000117568 (Evidence)
• NCBI Gene
  100417795

Representative Sequences			Length	Strain/Species
genomic	100417795	NCBI Gene Model | MGI Sequence Detail	741	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;