Gm18800 Pseudogene Detail

Summary

• Symbol
  Gm18800
• Name
  predicted gene, 18800

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:5010985
  NCBI Gene: 100417745
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:53365340-53371883 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 26.99 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  356 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010985	pseudogene	Chr1:53365332-53381429 (-)
129S1/SvImJ	ENSMUSG00200018717	pseudogene	Chr1:50840475-50856455 (-)
A/J	ENSMUSG00195030927	pseudogene	Chr1:50740124-50756105 (-)
AKR/J	ENSMUSG00220042769	pseudogene	Chr1:50491400-50507380 (-)
BALB/cJ	ENSMUSG00180014369	pseudogene	Chr1:50667028-50683007 (-)
C3H/HeJ	ENSMUSG00175001180	pseudogene	Chr1:50766287-50782266 (-)
C57BL/6NJ	ENSMUSG00215035507	pseudogene	Chr1:50693733-50709710 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036939	pseudogene	Chr1:40787248-40804665 (+)
CAST/EiJ	ENSTCUG00005014181	pseudogene	Chr1:50585365-50606765 (-)
CBA/J	ENSMUSG00210029223	pseudogene	Chr1:50471637-50487616 (-)
DBA/2J	ENSMUSG00185054885	pseudogene	Chr1:51591251-51607231 (-)
FVB/NJ	ENSMUSG00205021957	pseudogene	Chr1:50431648-50447628 (-)
JF1/MsJ	ENSUMUG00000047060	pseudogene	Chr1:50545258-50566554 (-)
LP/J	ENSMUSG00230029028	pseudogene	Chr1:51587449-51603429 (-)
NOD/ShiLtJ	ENSMUSG00190042251	pseudogene	Chr1:50608183-50624166 (-)
NZO/HlLtJ	ENSMUSG00225009521	pseudogene	Chr1:54785308-54809637 (-)
PWK/PhJ	ENSLUMG00010002833	pseudogene	Chr1:50101348-50122623 (-)
SPRET/EiJ	ENSMSPG00010026113	pseudogene	Chr1:51839376-51862558 (-)
WSB/EiJ	ENSIUOG00005003655	pseudogene	Chr1:50296711-50312692 (-)

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm18800
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000101838 (Evidence), ENSMUSG00000121346 (Evidence)
• NCBI Gene
  100417745

Representative Sequences			Length	Strain/Species
genomic	100417745	NCBI Gene Model | MGI Sequence Detail	6544	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45