Gm18795 Pseudogene Detail

Summary

• Symbol
  Gm18795
• Name
  predicted gene, 18795

• Feature Type
  pseudogene
• IDs
  MGI:5010980
  NCBI Gene: 100417738
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:101184435-101249969 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 51.23 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1356 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010980	pseudogene	Chr12:101184435-101339102 (+)
129S1/SvImJ	ENSMUSG00200026043	pseudogene	Chr12:92995902-93148105 (+)
A/J	ENSMUSG00195022498	pseudogene	Chr12:95514281-95669227 (+)
AKR/J	ENSMUSG00220043993	pseudogene	Chr12:93474296-93627176 (+)
BALB/cJ	ENSMUSG00180038587	pseudogene	Chr12:94720427-94873310 (+)
C3H/HeJ	ENSMUSG00175034241	pseudogene	Chr12:97327225-97482179 (+)
C57BL/6NJ	ENSMUSG00215041858	pseudogene	Chr12:93985372-94140309 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210014887	pseudogene	Chr12:94379261-94532139 (+)
DBA/2J	ENSMUSG00185046648	pseudogene	Chr12:96170888-96324116 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000028116	pseudogene	Chr12:100885832-101038094 (+)
LP/J	ENSMUSG00230030982	pseudogene	Chr12:103260972-103413173 (+)
NOD/ShiLtJ	ENSMUSG00190005314	pseudogene	Chr12:91611074-91763944 (-)
NZO/HlLtJ	ENSMUSG00225038955	pseudogene	Chr12:104984712-105136911 (+)
PWK/PhJ	ENSLUMG00010014405	pseudogene	Chr12:94351810-94506690 (+)
SPRET/EiJ	ENSMSPG00010020171	pseudogene	Chr12:96839066-96996133 (+)
WSB/EiJ	ENSIUOG00005010042	pseudogene	Chr12:93379712-93541928 (+)

Homology

• Gene Tree
  Gm18795
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18795
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000113134 (Evidence)
• NCBI Gene
  100417738

Representative Sequences			Length	Strain/Species
genomic	100417738	NCBI Gene Model | MGI Sequence Detail	65535	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm18795:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr114728	Chr12:101188321-101188341 (+)	3,896 bp