Gm18789 Pseudogene Detail

Summary

• Symbol
  Gm18789
• Name
  predicted gene, 18789

• Feature Type
  pseudogene
• IDs
  MGI:5010974
  NCBI Gene: 100417728
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:14826768-14827317 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 4.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010974	pseudogene	Chr9:14826768-14827317 (-)
129S1/SvImJ	ENSMUSG00200049901	pseudogene	Chr9:11728601-11729150 (-)
A/J	ENSMUSG00195041233	pseudogene	Chr9:11614184-11614733 (-)
AKR/J	ENSMUSG00220035208	pseudogene	Chr9:11591615-11592164 (-)
BALB/cJ	ENSMUSG00180044496	pseudogene	Chr9:11738069-11738618 (-)
C3H/HeJ	ENSMUSG00175043981	pseudogene	Chr9:11685097-11685646 (-)
C57BL/6NJ	ENSMUSG00215038520	pseudogene	Chr9:11679692-11680241 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034543	pseudogene	Chr9:11720885-11721434 (-)
CBA/J	ENSMUSG00210044340	pseudogene	Chr9:11716059-11716608 (-)
DBA/2J	ENSMUSG00185027898	pseudogene	Chr9:11804769-11805318 (-)
FVB/NJ	ENSMUSG00205044985	pseudogene	Chr9:11788791-11789340 (-)
JF1/MsJ	ENSUMUG00000046873	pseudogene	Chr9:11793108-11793657 (-)
LP/J	ENSMUSG00230044070	pseudogene	Chr9:12226697-12227246 (-)
NOD/ShiLtJ	ENSMUSG00190042012	pseudogene	Chr9:11715287-11715836 (-)
NZO/HlLtJ	ENSMUSG00225051035	pseudogene	Chr9:12115530-12116079 (-)
PWK/PhJ	ENSLUMG00010047703	pseudogene	Chr9:11724792-11725341 (-)
SPRET/EiJ	ENSMSPG00010027218	pseudogene	Chr9:11909580-11910117 (-)
WSB/EiJ	ENSIUOG00005046556	pseudogene	Chr9:11383637-11384186 (-)

Homology

• Gene Tree
  Gm18789
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000110995 (Evidence)
• NCBI Gene
  100417728

Representative Sequences			Length	Strain/Species
genomic	100417728	NCBI Gene Model | MGI Sequence Detail	550	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;