Gm18784 Pseudogene Detail

Summary

• Symbol
  Gm18784
• Name
  predicted gene, 18784

• Feature Type
  pseudogene
• IDs
  MGI:5010969
  NCBI Gene: 100417723
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:39424278-39426376 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 19.16 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  39 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010969	pseudogene	Chr17:39424278-39426376 (+)
129S1/SvImJ	ENSMUSG00200051797	pseudogene	Chr17:34878930-34881026 (+)
A/J	ENSMUSG00195048205	pseudogene	Chr17:36089084-36091176 (+)
AKR/J	ENSMUSG00220052949	pseudogene	Chr17:35125931-35128023 (+)
BALB/cJ	ENSMUSG00180046750	pseudogene	Chr17:35900870-35902962 (+)
C3H/HeJ	ENSMUSG00175046119	pseudogene	Chr17:35096895-35098985 (+)
C57BL/6NJ	ENSMUSG00215053947	pseudogene	Chr17:34709169-34711267 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051627	pseudogene	Chr17:36218296-36220386 (+)
CBA/J	ENSMUSG00210052670	pseudogene	Chr17:34834840-34836932 (+)
DBA/2J	ENSMUSG00185055350	pseudogene	Chr17:37881724-37883814 (+)
FVB/NJ	ENSMUSG00205053749	pseudogene	Chr17:35350572-35352620 (+)
JF1/MsJ	ENSUMUG00000057477	pseudogene	Chr17:36966747-36968837 (+)
LP/J	ENSMUSG00230054892	pseudogene	Chr17:38991575-38993671 (+)
NOD/ShiLtJ	ENSMUSG00190053902	pseudogene	Chr17:34757008-34759092 (+)
NZO/HlLtJ	ENSMUSG00225044187	pseudogene	Chr17:40970124-40972210 (+)
PWK/PhJ	ENSLUMG00010044874	pseudogene	Chr17:34670875-34672949 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005052008	pseudogene	Chr17:35931717-35933777 (+)

Homology

• Gene Tree
  Gm18784
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000117207 (Evidence)
• NCBI Gene
  100417723

Representative Sequences			Length	Strain/Species
genomic	100417723	NCBI Gene Model | MGI Sequence Detail	2099	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;