Gm18769 Pseudogene Detail

Summary

• Symbol
  Gm18769
• Name
  predicted gene, 18769

• Feature Type
  pseudogene
• IDs
  MGI:5010954
  NCBI Gene: 100417699
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:20779377-20779892 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 12.56 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  153 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010954	pseudogene	Chr16:20779377-20779892 (-)
129S1/SvImJ	ENSMUSG00200048078	pseudogene	Chr16:17776872-17777387 (-)
A/J	ENSMUSG00195037143	pseudogene	Chr16:17335092-17335607 (-)
AKR/J	ENSMUSG00220046276	pseudogene	Chr16:17654520-17655035 (-)
BALB/cJ	ENSMUSG00180042611	pseudogene	Chr16:17575703-17576218 (-)
C3H/HeJ	ENSMUSG00175051503	pseudogene	Chr16:17720749-17721264 (-)
C57BL/6NJ	ENSMUSG00215042312	pseudogene	Chr16:17447899-17448414 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005046277	pseudogene	Chr16:18046703-18047218 (-)
CBA/J	ENSMUSG00210048139	pseudogene	Chr16:17742483-17742998 (-)
DBA/2J	ENSMUSG00185033986	pseudogene	Chr16:17681231-17681746 (-)
FVB/NJ	ENSMUSG00205048793	pseudogene	Chr16:17681225-17681740 (-)
JF1/MsJ	ENSUMUG00000054376	pseudogene	Chr16:17879645-17880160 (-)
LP/J	ENSMUSG00230034075	pseudogene	Chr16:20260478-20260993 (-)
NOD/ShiLtJ	ENSMUSG00190051415	pseudogene	Chr16:17822753-17823268 (-)
NZO/HlLtJ	ENSMUSG00225039246	pseudogene	Chr16:23511546-23512061 (-)
PWK/PhJ	ENSLUMG00010048951	pseudogene	Chr16:17693183-17693698 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005043741	pseudogene	Chr16:17925584-17926099 (-)

Homology

• Gene Tree
  Gm18769
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000116732 (Evidence)
• NCBI Gene
  100417699

Representative Sequences			Length	Strain/Species
genomic	100417699	NCBI Gene Model | MGI Sequence Detail	516	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;