Gm18764 Pseudogene Detail

Summary

• Symbol
  Gm18764
• Name
  predicted gene, 18764

• Feature Type
  pseudogene
• IDs
  MGI:5010949
  NCBI Gene: 100417684
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:10859680-10860433 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 5.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  117 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010949	pseudogene	Chr18:10859678-10860433 (+)
129S1/SvImJ	ENSMUSG00200025160	pseudogene	Chr18:7805335-7806087 (+)
A/J	ENSMUSG00195008754	pseudogene	Chr18:7978608-7979361 (+)
AKR/J	ENSMUSG00220019654	pseudogene	Chr18:7969811-7970564 (+)
BALB/cJ	ENSMUSG00180005355	pseudogene	Chr18:8418918-8419671 (+)
C3H/HeJ	ENSMUSG00175007849	pseudogene	Chr18:7954253-7955006 (+)
C57BL/6NJ	ENSMUSG00215023915	pseudogene	Chr18:7696333-7697086 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017746	pseudogene	Chr18:7789177-7789930 (+)
CBA/J	ENSMUSG00210022032	pseudogene	Chr18:7967171-7967924 (+)
DBA/2J	ENSMUSG00185032029	pseudogene	Chr18:7974634-7975387 (+)
FVB/NJ	ENSMUSG00205033657	pseudogene	Chr18:7753823-7754576 (+)
JF1/MsJ	ENSUMUG00000042033	pseudogene	Chr18:8039001-8039753 (+)
LP/J	ENSMUSG00230012677	pseudogene	Chr18:10049829-10050581 (+)
NOD/ShiLtJ	ENSMUSG00190010150	pseudogene	Chr18:7747325-7748078 (+)
NZO/HlLtJ	ENSMUSG00225034293	pseudogene	Chr18:9958041-9958794 (+)
PWK/PhJ	ENSLUMG00010010366	pseudogene	Chr18:8258062-8258814 (+)
SPRET/EiJ	ENSMSPG00010012187	pseudogene	Chr18:7893893-7894647 (+)
WSB/EiJ	ENSIUOG00005027181	pseudogene	Chr18:7827982-7828735 (+)

Homology

• Gene Tree
  Gm18764
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000117593 (Evidence)
• NCBI Gene
  100417684

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117593	Ensembl Gene Model | MGI Sequence Detail	754	C57BL/6J
transcript	ENSMUST00000235066	Ensembl | MGI Sequence Detail	754	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;