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Nlrp5-ps Pseudogene Detail
Summary
  • Symbol
    Nlrp5-ps
  • Name
    NLR family, pyrin domain containing 5, pseudogene
  • Synonyms
    Gm18756
Location &
Maps
more
  • Sequence Map
    Chr7:14297224-14343264 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 7, 8.24 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    205 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5010941
pseudogene Chr7:14264579-14356991 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039845
pseudogene Chr7:12131566-12203096 (-)
A/J MGP_AJ_G0039847
pseudogene Chr7:11849842-11901722 (-)
AKR/J MGP_AKRJ_G0039773
pseudogene Chr7:12170799-12264677 (-)
BALB/cJ MGP_BALBcJ_G0039820
pseudogene Chr7:12011013-12079371 (-)
C3H/HeJ MGP_C3HHeJ_G0039473
pseudogene Chr7:12330433-12406943 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040392
pseudogene Chr7:12663644-12796413 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036987
pseudogene Chr7:22678961-22707894 (+)
CAST/EiJ MGP_CASTEiJ_G0038580
pseudogene Chr7:9499696-9586519 (-)
CBA/J MGP_CBAJ_G0039442
pseudogene Chr7:12948981-13047913 (-)
DBA/2J MGP_DBA2J_G0039643
pseudogene Chr7:11781181-11865144 (-)
FVB/NJ MGP_FVBNJ_G0039603
pseudogene Chr7:11693300-12616721 (-)
LP/J MGP_LPJ_G0039680
pseudogene Chr7:12211036-12270449 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039598
pseudogene Chr7:13184508-13252428 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040490
pseudogene Chr7:11920919-12011648 (-)
PWK/PhJ MGP_PWKPhJ_G0038258
pseudogene Chr7:9917146-10009997 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038003
pseudogene Chr7:7636250-7690670 (-)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041596 Ensembl Gene Model | MGI Sequence Detail 46041 C57BL/6J ±  kb
transcript ENSMUST00000173220 Ensembl | MGI Sequence Detail 1294 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
    Phenotypes 1
  • Earliest
    J:340071 Ji S, et al., OBOX regulates mouse zygotic genome activation and early development. Nature. 2023 Aug;620(7976):1047-1053

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory