Gm18734 Pseudogene Detail

Summary

• Symbol
  Gm18734
• Name
  predicted gene, 18734

• Feature Type
  pseudogene
• IDs
  MGI:5010919
  NCBI Gene: 100417645
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:35523182-35525293 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 18.62 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010919	pseudogene	Chr17:35522982-35525294 (-)
129S1/SvImJ	ENSMUSG00200051541	pseudogene	Chr17:31227306-31229417 (-)
A/J	ENSMUSG00195047022	pseudogene	Chr17:32138402-32140511 (-)
AKR/J	ENSMUSG00220052266	pseudogene	Chr17:31153261-31155372 (-)
BALB/cJ	ENSMUSG00180043876	pseudogene	Chr17:31508239-31510348 (-)
C3H/HeJ	ENSMUSG00175045883	pseudogene	Chr17:31039370-31041481 (-)
C57BL/6NJ	ENSMUSG00215054041	pseudogene	Chr17:31067546-31069657 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037185	pseudogene	Chr17:30289076-30291179 (+)
CAST/EiJ	ENSTCUG00005052353	pseudogene	Chr17:32091613-32098005 (-)
CBA/J	ENSMUSG00210052263	pseudogene	Chr17:30861460-30863571 (-)
DBA/2J	ENSMUSG00185055066	pseudogene	Chr17:33527450-33529559 (-)
FVB/NJ	ENSMUSG00205053851	pseudogene	Chr17:31385601-31387710 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230054711	pseudogene	Chr17:34625534-34627645 (-)
NOD/ShiLtJ	ENSMUSG00190053685	pseudogene	Chr17:30986110-30988221 (-)
NZO/HlLtJ	ENSMUSG00225055037	pseudogene	Chr17:36649343-36651453 (-)
PWK/PhJ	ENSLUMG00010045411	pseudogene	Chr17:30678759-30680872 (-)
SPRET/EiJ	ENSMSPG00010050902	pseudogene	Chr17:31797191-31802277 (-)
WSB/EiJ	ENSIUOG00005052217	pseudogene	Chr17:31766983-31768986 (-)

Homology

• Gene Tree
  Gm18734
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm18734
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000092438 (Evidence)
• NCBI Gene
  100417645

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092438	Ensembl Gene Model | MGI Sequence Detail	2112	C57BL/6J
transcript	ENSMUST00000172937	Ensembl | MGI Sequence Detail	808	Not Applicable

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53