Gm18730 Pseudogene Detail

Summary

• Symbol
  Gm18730
• Name
  predicted gene, 18730

• Feature Type
  pseudogene
• IDs
  MGI:5010915
  NCBI Gene: 100417640
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:121236618-121237196 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 69.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010915	pseudogene	Chr10:121236618-121237197 (+)
129S1/SvImJ	ENSMUSG00200027183	pseudogene	Chr10:117589681-117590259 (+)
A/J	ENSMUSG00195022483	pseudogene	Chr10:117994155-117994732 (+)
AKR/J	ENSMUSG00220015324	pseudogene	Chr10:117632212-117632790 (+)
BALB/cJ	ENSMUSG00180018641	pseudogene	Chr10:118006603-118007180 (+)
C3H/HeJ	ENSMUSG00175024836	pseudogene	Chr10:118009843-118010421 (+)
C57BL/6NJ	ENSMUSG00215017689	pseudogene	Chr10:117648629-117649207 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033883	pseudogene	Chr10:116979644-116980230 (+)
CBA/J	ENSMUSG00210021882	pseudogene	Chr10:117846574-117847152 (+)
DBA/2J	ENSMUSG00185009593	pseudogene	Chr10:117957906-117958483 (+)
FVB/NJ	ENSMUSG00205026050	pseudogene	Chr10:117243750-117244327 (+)
JF1/MsJ	ENSUMUG00000025374	pseudogene	Chr10:119249735-119249765 (+)
LP/J	ENSMUSG00230026068	pseudogene	Chr10:119917756-119918334 (+)
NOD/ShiLtJ	ENSMUSG00190019828	pseudogene	Chr10:118049926-118050503 (+)
NZO/HlLtJ	ENSMUSG00225038132	pseudogene	Chr10:124167428-124168006 (+)
PWK/PhJ	ENSLUMG00010013547	pseudogene	Chr10:117645240-117645798 (+)
SPRET/EiJ	ENSMSPG00010017294	pseudogene	Chr10:119560175-119560369 (+)
WSB/EiJ	ENSIUOG00005014092	pseudogene	Chr10:117684647-117685225 (+)

Homology

• Gene Tree
  Gm18730
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000112209 (Evidence)
• NCBI Gene
  100417640

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112209	Ensembl Gene Model | MGI Sequence Detail	579	C57BL/6J
transcript	ENSMUST00000218038	Ensembl | MGI Sequence Detail	343	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;