Gm18724 Pseudogene Detail

Summary

• Symbol
  Gm18724
• Name
  predicted gene, 18724

• Feature Type
  pseudogene
• IDs
  MGI:5010909
  NCBI Gene: 100417626
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:10864799-10865796 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 6.32 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010909	pseudogene	Chr16:10864768-10866154 (+)
129S1/SvImJ	ENSMUSG00200011863	pseudogene	Chr16:7870312-7871694 (+)
A/J	ENSMUSG00195011878	pseudogene	Chr16:7408415-7409801 (+)
AKR/J	ENSMUSG00220017521	pseudogene	Chr16:7697220-7698606 (+)
BALB/cJ	ENSMUSG00180008742	pseudogene	Chr16:7647618-7649004 (+)
C3H/HeJ	ENSMUSG00175030494	pseudogene	Chr16:7838987-7840373 (+)
C57BL/6NJ	ENSMUSG00215023666	pseudogene	Chr16:7514296-7515682 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032328	pseudogene	Chr16:7772644-7774108 (+)
CBA/J	ENSMUSG00210012220	pseudogene	Chr16:7856139-7857525 (+)
DBA/2J	ENSMUSG00185010234	pseudogene	Chr16:7801487-7802873 (+)
FVB/NJ	ENSMUSG00205014182	pseudogene	Chr16:7717639-7719025 (+)
JF1/MsJ	ENSUMUG00000037520	pseudogene	Chr16:7918684-7920813 (+)
LP/J	ENSMUSG00230046661	pseudogene	Chr16:10366080-10367462 (+)
NOD/ShiLtJ	ENSMUSG00190027340	pseudogene	Chr16:7899813-7901199 (+)
NZO/HlLtJ	ENSMUSG00225032403	pseudogene	Chr16:13584124-13585510 (+)
PWK/PhJ	ENSLUMG00010018000	pseudogene	Chr16:7771394-7773355 (+)
SPRET/EiJ	ENSMSPG00010017807	pseudogene	Chr16:7739324-7740828 (+)
WSB/EiJ	ENSIUOG00005016924	pseudogene	Chr16:7865318-7866709 (+)

Homology

• Gene Tree
  Gm18724
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116274 (Evidence)
• NCBI Gene
  100417626

Representative Sequences			Length	Strain/Species
genomic	100417626	NCBI Gene Model | MGI Sequence Detail	998	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;