Gm18694 Pseudogene Detail

Summary

• Symbol
  Gm18694
• Name
  predicted gene, 18694

• Feature Type
  pseudogene
• IDs
  MGI:5010879
  NCBI Gene: 100417576
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:49189415-49190640 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 30.83 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  153 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010879	pseudogene	Chr16:49189415-49190640 (+)
129S1/SvImJ	ENSMUSG00200021564	pseudogene	Chr16:46067983-46069211 (+)
A/J	ENSMUSG00195003487	pseudogene	Chr16:45676825-45678050 (+)
AKR/J	ENSMUSG00220022749	pseudogene	Chr16:46030160-46031385 (+)
BALB/cJ	ENSMUSG00180029582	pseudogene	Chr16:45881519-45882744 (+)
C3H/HeJ	ENSMUSG00175026409	pseudogene	Chr16:46163612-46164802 (+)
C57BL/6NJ	ENSMUSG00215008513	pseudogene	Chr16:45991026-45992251 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012811	pseudogene	Chr16:46302367-46303592 (+)
CBA/J	ENSMUSG00210016840	pseudogene	Chr16:46193392-46194582 (+)
DBA/2J	ENSMUSG00185010949	pseudogene	Chr16:46060996-46062221 (+)
FVB/NJ	ENSMUSG00205013421	pseudogene	Chr16:45967138-45968363 (+)
JF1/MsJ	ENSUMUG00000033062	pseudogene	Chr16:46291815-46293040 (+)
LP/J	ENSMUSG00230029272	pseudogene	Chr16:48627308-48628533 (+)
NOD/ShiLtJ	ENSMUSG00190019716	pseudogene	Chr16:46083993-46085218 (+)
NZO/HlLtJ	ENSMUSG00225026181	pseudogene	Chr16:51719179-51720404 (+)
PWK/PhJ	ENSLUMG00010028103	pseudogene	Chr16:46118403-46119593 (+)
SPRET/EiJ	ENSMSPG00010007828	pseudogene	Chr16:46368803-46370030 (+)
WSB/EiJ	ENSIUOG00005013436	pseudogene	Chr16:46267062-46268290 (+)

Homology

• Gene Tree
  Gm18694
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116700 (Evidence)
• NCBI Gene
  100417576

Representative Sequences			Length	Strain/Species
genomic	100417576	NCBI Gene Model | MGI Sequence Detail	1226	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;