Gm18683 Pseudogene Detail

Summary

• Symbol
  Gm18683
• Name
  predicted gene, 18683

• Feature Type
  pseudogene
• IDs
  MGI:5010868
  NCBI Gene: 100417550
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:74170467-74171049 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 39.10 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010868	pseudogene	Chr14:74170458-74171051 (+)
129S1/SvImJ	ENSMUSG00200011168	pseudogene	Chr14:62605895-62606477 (+)
A/J	ENSMUSG00195004241	pseudogene	Chr14:62740515-62741097 (+)
AKR/J	ENSMUSG00220007540	pseudogene	Chr14:62058174-62058756 (+)
BALB/cJ	ENSMUSG00180023745	pseudogene	Chr14:62346970-62347552 (+)
C3H/HeJ	ENSMUSG00175031815	pseudogene	Chr14:64082707-64083289 (+)
C57BL/6NJ	ENSMUSG00215026077	pseudogene	Chr14:62322392-62322974 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032908	pseudogene	Chr14:63988277-63988863 (+)
CBA/J	ENSMUSG00210010386	pseudogene	Chr14:62721361-62721943 (+)
DBA/2J	ENSMUSG00185024225	pseudogene	Chr14:67868089-67868671 (+)
FVB/NJ	ENSMUSG00205025970	pseudogene	Chr14:62166606-62167188 (+)
JF1/MsJ	ENSUMUG00000046051	pseudogene	Chr14:79082140-79082726 (+)
LP/J	ENSMUSG00230017355	pseudogene	Chr14:79956034-79956616 (+)
NOD/ShiLtJ	ENSMUSG00190011416	pseudogene	Chr14:62491079-62491661 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010011428	pseudogene	Chr14:61954701-61955282 (+)
SPRET/EiJ	ENSMSPG00010028528	pseudogene	Chr14:65568246-65568828 (+)
WSB/EiJ	ENSIUOG00005023958	pseudogene	Chr14:61931858-61932439 (+)

Homology

• Gene Tree
  Gm18683
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18683
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000115470 (Evidence)
• NCBI Gene
  100417550

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115470	Ensembl Gene Model | MGI Sequence Detail	583	C57BL/6J
transcript	ENSMUST00000228234	Ensembl | MGI Sequence Detail	583	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;