Gm18681 Pseudogene Detail

Summary

• Symbol
  Gm18681
• Name
  predicted gene, 18681

• Feature Type
  pseudogene
• IDs
  MGI:5010866
  NCBI Gene: 100417548
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:30145222-30145830 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 18.72 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010866	pseudogene	Chr14:30145222-30145840 (+)
129S1/SvImJ	ENSMUSG00200038618	pseudogene	Chr14:21966948-21967561 (+)
A/J	ENSMUSG00195013917	pseudogene	Chr14:23037136-23037749 (+)
AKR/J	ENSMUSG00220037166	pseudogene	Chr14:22151661-22152274 (+)
BALB/cJ	ENSMUSG00180029678	pseudogene	Chr14:22125743-22126356 (+)
C3H/HeJ	ENSMUSG00175043182	pseudogene	Chr14:22193017-22193630 (+)
C57BL/6NJ	ENSMUSG00215032811	pseudogene	Chr14:22436689-22437302 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025234	pseudogene	Chr14:22273022-22273634 (+)
CBA/J	ENSMUSG00210044072	pseudogene	Chr14:22435984-22436597 (+)
DBA/2J	ENSMUSG00185042484	pseudogene	Chr14:26710711-26711324 (+)
FVB/NJ	ENSMUSG00205040279	pseudogene	Chr14:22295016-22295629 (+)
JF1/MsJ	ENSUMUG00000050403	pseudogene	Chr14:33967492-33968104 (+)
LP/J	ENSMUSG00230038004	pseudogene	Chr14:33990980-33991593 (+)
NOD/ShiLtJ	ENSMUSG00190019622	pseudogene	Chr14:22449586-22450199 (+)
NZO/HlLtJ	ENSMUSG00225037887	pseudogene	Chr14:28324270-28324883 (+)
PWK/PhJ	ENSLUMG00010022798	pseudogene	Chr14:10560707-10561319 (+)
SPRET/EiJ	ENSMSPG00010042783	pseudogene	Chr14:24098675-24099272 (+)
WSB/EiJ	ENSIUOG00005012727	pseudogene	Chr14:22261364-22261977 (+)

Homology

• Gene Tree
  Gm18681
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000114966 (Evidence)
• NCBI Gene
  100417548

Representative Sequences			Length	Strain/Species
genomic	100417548	NCBI Gene Model | MGI Sequence Detail	609	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;