Rab5a-ps Pseudogene Detail

Summary

• Symbol
  Rab5a-ps
• Name
  RAB5A, member RAS oncogene family, pseudogene
• Synonyms
  Gm18680

• Feature Type
  pseudogene
• IDs
  MGI:5010865
  NCBI Gene: 100417546
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:54009348-54010000 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 27.93 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  210 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010865	pseudogene	Chr17:54009151-54010094 (-)
129S1/SvImJ	ENSMUSG00200028730	pseudogene	Chr17:49237302-49237954 (-)
A/J	ENSMUSG00195007069	pseudogene	Chr17:50689610-50690262 (-)
AKR/J	ENSMUSG00220038777	pseudogene	Chr17:49697251-49697903 (-)
BALB/cJ	ENSMUSG00180006439	pseudogene	Chr17:50445787-50446439 (-)
C3H/HeJ	ENSMUSG00175017228	pseudogene	Chr17:49752948-49753600 (-)
C57BL/6NJ	ENSMUSG00215035949	pseudogene	Chr17:49340300-49340952 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019472	pseudogene	Chr17:50546476-50547128 (-)
CBA/J	ENSMUSG00210040289	pseudogene	Chr17:49502457-49503109 (-)
DBA/2J	ENSMUSG00185009600	pseudogene	Chr17:52403025-52403677 (-)
FVB/NJ	ENSMUSG00205052741	pseudogene	Chr17:49969786-49970438 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230029179	pseudogene	Chr17:53349869-53350521 (-)
NOD/ShiLtJ	ENSMUSG00190018108	pseudogene	Chr17:49466605-49467257 (-)
NZO/HlLtJ	ENSMUSG00225043584	pseudogene	Chr17:55610420-55611072 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010038347	pseudogene	Chr17:49622640-49623291 (-)
WSB/EiJ	ENSIUOG00005024940	pseudogene	Chr17:50424884-50425536 (-)

Homology

• Gene Tree
  Rab5a-ps
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000107684 (Evidence)
• NCBI Gene
  100417546

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107684	Ensembl Gene Model | MGI Sequence Detail	653	C57BL/6J
transcript	ENSMUST00000203252	Ensembl | MGI Sequence Detail	653	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;