Gm18645 Pseudogene Detail

Summary

• Symbol
  Gm18645
• Name
  predicted gene, 18645

• Feature Type
  pseudogene
• IDs
  MGI:5010830
  NCBI Gene: 100417494
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:63975970-63978924 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 32.05 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  32

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010830	pseudogene	Chr8:63975954-63978924 (+)
129S1/SvImJ	ENSMUSG00200007638	pseudogene	Chr8:58804383-58807342 (+)
129S1/SvImJ	ENSMUSG00200007633	pseudogene	Chr8:58804381-58807339 (+)
A/J	ENSMUSG00195012828	pseudogene	Chr8:59150167-59153124 (+)
A/J	ENSMUSG00195012822	pseudogene	Chr8:59150165-59153121 (+)
AKR/J	ENSMUSG00220006441	pseudogene	Chr8:58986652-58989617 (+)
AKR/J	ENSMUSG00220006433	pseudogene	Chr8:58986650-58989614 (+)
BALB/cJ	ENSMUSG00180014674	pseudogene	Chr8:58779746-58782713 (+)
BALB/cJ	ENSMUSG00180014669	pseudogene	Chr8:58779744-58782710 (+)
C3H/HeJ	ENSMUSG00175008030	pseudogene	Chr8:59004836-59007799 (+)
C3H/HeJ	ENSMUSG00175008017	pseudogene	Chr8:59004834-59007796 (+)
C57BL/6NJ	ENSMUSG00215008747	pseudogene	Chr8:58797873-58800833 (+)
C57BL/6NJ	ENSMUSG00215008767	pseudogene	Chr8:58797875-58800836 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006818	pseudogene	Chr8:58641672-58644623 (+)
CAST/EiJ	ENSTCUG00005006819	pseudogene	Chr8:58641674-58644626 (+)
CBA/J	ENSMUSG00210009647	pseudogene	Chr8:58885858-58888820 (+)
CBA/J	ENSMUSG00210009652	pseudogene	Chr8:58885860-58888823 (+)
DBA/2J	ENSMUSG00185023195	pseudogene	Chr8:64939275-64942239 (+)
DBA/2J	ENSMUSG00185023209	pseudogene	Chr8:64939277-64942242 (+)
FVB/NJ	ENSMUSG00205013603	pseudogene	Chr8:58231836-58234805 (+)
FVB/NJ	ENSMUSG00205013573	pseudogene	Chr8:58231834-58234802 (+)
JF1/MsJ	ENSUMUG00000015253	pseudogene	Chr8:67209404-67212421 (+)
LP/J	ENSMUSG00230007013	pseudogene	Chr8:68597414-68600373 (+)
LP/J	ENSMUSG00230007345	pseudogene	Chr8:68597412-68600370 (+)
NOD/ShiLtJ	ENSMUSG00190010008	pseudogene	Chr8:58756350-58759310 (+)
NOD/ShiLtJ	ENSMUSG00190010011	pseudogene	Chr8:58756352-58759313 (+)
NZO/HlLtJ	ENSMUSG00225048650	pseudogene	Chr8:72035856-72038821 (+)
NZO/HlLtJ	ENSMUSG00225048710	pseudogene	Chr8:72035854-72038818 (+)
PWK/PhJ	ENSLUMG00010013851	pseudogene	Chr8:58691078-58694037 (+)
PWK/PhJ	ENSLUMG00010013843	pseudogene	Chr8:58691076-58694034 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005017900	pseudogene	Chr8:59710783-59713743 (+)
WSB/EiJ	ENSIUOG00005017906	pseudogene	Chr8:59710785-59713746 (+)

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18645
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  38
• RefSeq
  1

• Ensembl
  ENSMUSG00000110300 (Evidence), ENSMUSG00000110678 (Evidence)
• NCBI Gene
  100417494

Representative Sequences			Length	Strain/Species
genomic	100417494	NCBI Gene Model | MGI Sequence Detail	2955	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;