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Gm18642 Pseudogene Detail
Summary
  • Symbol
    Gm18642
  • Name
    predicted gene, 18642
Location &
Maps
more
  • Sequence Map
    Chr7:56675829-56677228 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 33.52 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    95 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5010827
 pseudogene Chr7:56675767-56677282 (+)
129S1/SvImJ MGP_129S1SvImJ_G0013915
 pseudogene Chr7:57842795-57844194 (+)
A/J MGP_AJ_G0013934
 pseudogene Chr7:56961704-56963103 (+)
AKR/J MGP_AKRJ_G0013868
 pseudogene Chr7:58285669-58287068 (+)
BALB/cJ MGP_BALBcJ_G0013890
 pseudogene Chr7:56544664-56546063 (+)
C3H/HeJ MGP_C3HHeJ_G0013727
 pseudogene Chr7:58624356-58625755 (+)
C57BL/6NJ MGP_C57BL6NJ_G0014326
 pseudogene Chr7:60459647-60461046 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0012179
 pseudogene Chr7:59554186-59555567 (+)
CAST/EiJ MGP_CASTEiJ_G0013389
 pseudogene Chr7:49812153-49813545 (+)
CBA/J MGP_CBAJ_G0013709
 pseudogene Chr7:62554403-62555802 (+)
DBA/2J MGP_DBA2J_G0013786
 pseudogene Chr7:55955793-55957192 (+)
FVB/NJ MGP_FVBNJ_G0013788
 pseudogene Chr7:55912175-55913574 (+)
LP/J MGP_LPJ_G0013859
 pseudogene Chr7:58935493-58936892 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0013814
 pseudogene Chr7:62134046-62135445 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0014282
 pseudogene Chr7:57286683-57288082 (+)
PWK/PhJ MGP_PWKPhJ_G0013202
 pseudogene Chr7:49202526-49203925 (+)
SPRET/EiJ MGP_SPRETEiJ_G0012968
 pseudogene Chr7:45318353-45319752 (+)
WSB/EiJ MGP_WSBEiJ_G0013450
 pseudogene Chr7:57895170-57896569 (+)



Homology
less
Human Diseases
less
  • References
    4 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    30 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000108377 Ensembl Gene Model | MGI Sequence Detail 1400 C57BL/6J ±  kb
transcript ENSMUST00000206642 Ensembl | MGI Sequence Detail 1400 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 33
    Diseases 4
    Phenotypes 30
  • Earliest
    J:56614 Gabriel JM, et al., A transgene insertion creating a heritable chromosome deletion mouse model of Prader-Willi and angelman syndromes. Proc Natl Acad Sci U S A. 1999 Aug 3;96(16):9258-63
  • Latest
    J:335224 Nakai N, et al., Virtual reality-based real-time imaging reveals abnormal cortical dynamics during behavioral transitions in a mouse model of autism. Cell Rep. 2023 Mar 24;:112258
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory