Gm18629 Pseudogene Detail

Summary

• Symbol
  Gm18629
• Name
  predicted gene, 18629

• Feature Type
  pseudogene
• IDs
  MGI:5010814
  NCBI Gene: 100417467
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:87995581-87996263 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 42.19 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010814	pseudogene	Chr12:87995581-87996527 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	ENSMUSG00180016274	pseudogene	Chr12:81567074-81568020 (+)
C3H/HeJ	ENSMUSG00175039813	pseudogene	Chr12:84483991-84484908 (+)
C57BL/6NJ	ENSMUSG00215046480	pseudogene	Chr12:80751096-80752042 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210047516	pseudogene	Chr12:81008887-81009833 (+)
DBA/2J	ENSMUSG00185003116	pseudogene	Chr12:82860798-82861744 (+)
FVB/NJ	ENSMUSG00205045106	pseudogene	Chr12:80645517-80646463 (-)
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225053164	pseudogene	Chr12:91860025-91860971 (+)
PWK/PhJ	ENSLUMG00010003615	pseudogene	Chr12:81017198-81018153 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005046837	pseudogene	Chr12:80691364-80692281 (+)

Homology

• Gene Tree
  Gm18629
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18629
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14
• RefSeq
  1

• Ensembl
  ENSMUSG00000114109 (Evidence)
• NCBI Gene
  100417467

Representative Sequences			Length	Strain/Species
genomic	100417467	NCBI Gene Model | MGI Sequence Detail	683	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;