Gm18625 Pseudogene Detail

Summary

• Symbol
  Gm18625
• Name
  predicted gene, 18625

• Feature Type
  pseudogene
• IDs
  MGI:5010810
  NCBI Gene: 100417463
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:87542863-87543123 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 41.72 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5010810	pseudogene	Chr12:87542863-87543133 (+)
129S1/SvImJ	ENSMUSG00200051236	pseudogene	Chr12:79559053-79559323 (+)
A/J	ENSMUSG00195034126	pseudogene	Chr12:82178877-82179147 (+)
AKR/J	ENSMUSG00220050660	pseudogene	Chr12:79974749-79975019 (+)
BALB/cJ	ENSMUSG00180015790	pseudogene	Chr12:81216152-81216422 (+)
C3H/HeJ	ENSMUSG00175038427	pseudogene	Chr12:84309477-84309747 (+)
C57BL/6NJ	ENSMUSG00215047583	pseudogene	Chr12:80522620-80522890 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032432	pseudogene	Chr12:80732177-80732447 (-)
CBA/J	ENSMUSG00210047478	pseudogene	Chr12:80727927-80728197 (+)
DBA/2J	ENSMUSG00185002840	pseudogene	Chr12:82579852-82580122 (+)
FVB/NJ	ENSMUSG00205044498	pseudogene	Chr12:80397405-80397675 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230045952	pseudogene	Chr12:89641938-89642208 (+)
NOD/ShiLtJ	ENSMUSG00190048920	pseudogene	Chr12:79795135-79795405 (+)
NZO/HlLtJ	ENSMUSG00225052847	pseudogene	Chr12:91679129-91679399 (+)
NZO/HlLtJ	ENSMUSG00225005575	pseudogene	Chr1:180641757-180642027 (+)
PWK/PhJ	ENSLUMG00010028835	pseudogene	Chr12:80611815-80612085 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005046394	pseudogene	Chr12:80449141-80449411 (+)

Homology

• Gene Tree
  Gm18625
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm18625
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000113323 (Evidence)
• NCBI Gene
  100417463

Representative Sequences			Length	Strain/Species
genomic	100417463	NCBI Gene Model | MGI Sequence Detail	261	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;